G16550


Basic Information

Item Value
gene id G16550
gene name NA
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 34100315 ~ 34100863 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU20555
GCAGCTGAGGTGCGCAGTTACAGCGCGGCCACACGGAGGCGCCCTGAACAGGGCCAGTGGAGACGGGTATGAGTGACGTCAGTACAGAGCCCCTGCGGGGTCAGCGCCGTGGCCACTGGGGCGGTGAGGAAGTGACGGGACTCCGGCGAGGTGTCGACCGGGATGACGAAGTGACACCCCGTGTGGAGACGCTGCTCCAGGGGCGACGGACTCGGGGGCGGGGCAGTCCTGATGGGGCGACTGAGGCGGCCGCCTCTCCCGGGCTACTATTGATCCGAGCCATTGCACACCGGATTGAGACAAACTGCTAATCGGGTGTGATGTCATGTGACTCGGGTCGCTGTGTTTTCAGCTCGATGATGACACGTGTCCGGCTGCCGAGTCAACTGCCACTGTGACGTCATAGGCAGCCGGTTCACTAGAGCAGCTCACAGGACGTGTCACAACTCGACGGAAGTGTTGGTGGAAGGTGAGAGTACCGCTCCCGCACAGAAGTAATACGGCACCAAAGACTTTGCAATGGAGAAGATACGCAGTTTCCTGAAGNNN

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU20555 True 549 TUCP 0.61 1 34100315 34100863

Neighbor

gene id symbol gene type direction distance location
AMCG00016905 spop coding upstream 298505 33791287 ~ 33801810 (+)
AMCG00016906 spop,LOC107754841 coding upstream 326782 33761418 ~ 33773533 (+)
AMCG00016897 s35b1,slc35b1,LOC106601597,LOC107590797 coding upstream 438008 33652917 ~ 33662307 (+)
AMCG00016902 NA coding upstream 472026 33625976 ~ 33628289 (+)
AMCG00016896 NA coding upstream 475780 33619292 ~ 33624535 (+)
AMCG00016910 NA coding downstream 68625 34169488 ~ 34191749 (+)
AMCG00016913 ptrf,LOC103029568,LOC105905374,LOC105028466,LOC107742253,LOC107664665,LOC103381660 coding downstream 168135 34268998 ~ 34271418 (+)
AMCG00016914 ptrfb,LOC105935706,LOC102209316,LOC102787483,LOC101465061,LOC103482185,LOC103142478 coding downstream 193350 34294213 ~ 34296833 (+)
AMCG00016912 stat3,LOC107653351 coding downstream 210005 34310868 ~ 34340346 (+)
AMCG00016916 NA coding downstream 259364 34360227 ~ 34435938 (+)
G16542 NA non-coding upstream 104933 33993182 ~ 33995382 (+)
G16512 NA non-coding upstream 449026 33651081 ~ 33651289 (+)
G16395 NA non-coding upstream 771973 33325094 ~ 33328342 (+)
G16351 NA non-coding upstream 919876 33180239 ~ 33180439 (+)
G16350 NA non-coding upstream 920375 33179705 ~ 33179940 (+)
G16552 NA non-coding downstream 3593 34104456 ~ 34105687 (+)
G16646 NA non-coding downstream 496959 34597822 ~ 34599917 (+)
G16668 NA non-coding downstream 635474 34736337 ~ 34736549 (+)
G16692 NA non-coding downstream 674962 34775825 ~ 34777047 (+)
G16698 NA non-coding downstream 720334 34821197 ~ 34821413 (+)
AMCG00016909 mien1,LOC107566883,LOC107755209 other upstream 719 34093276 ~ 34099596 (+)
G16546 NA other upstream 52595 34047371 ~ 34047720 (+)
AMCG00016901 NA other upstream 425954 33668593 ~ 33674361 (+)
AMCG00016898 NA other upstream 450235 33630012 ~ 33650080 (+)
AMCG00016880 dcaf7,LOC100702343,LOC105030232,LOC105898766 other upstream 766569 33320144 ~ 33333746 (+)
AMCG00016934 acly,aclya,LOC103369716,LOC108273769 other downstream 1057734 35158597 ~ 35204232 (+)
G17193 NA other downstream 4395188 38496051 ~ 38503632 (+)
AMCG00016979 NA other downstream 5138210 39239073 ~ 39254490 (+)
G17697 NA other downstream 8290434 42391297 ~ 42397787 (+)
AMCG00017078 LOC106565757 other downstream 10025351 44126214 ~ 44137931 (+)

Expression


Co-expression Network