Gene
RNA
| Item | Value |
|---|---|
| gene id | G16988 |
| gene name | NA |
| gene type | non-coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030122.1 |
| NCBI id | CM030122.1 |
| chromosome length | 54868152 |
| location | 37195762 ~ 37196078 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU21067 | True | 317 | lncRNA | 0.55 | 1 | 37195762 | 37196078 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00016954 | txnrd3,LOC100702976,LOC106511133 | coding | downstream | 493780 | 36682750 ~ 36701982 (-) |
| AMCG00016953 | LOC107715024,LOC107664194,LOC102787184 | coding | downstream | 625751 | 36566281 ~ 36570011 (-) |
| AMCG00016952 | NA | coding | downstream | 916085 | 36252375 ~ 36279677 (-) |
| AMCG00016944 | lhfpl4,LOC107716887 | coding | downstream | 1470729 | 35724533 ~ 35725033 (-) |
| AMCG00016942 | NA | coding | downstream | 1710866 | 35457197 ~ 35484896 (-) |
| AMCG00016955 | plxna1,LOC106572368 | coding | upstream | 222349 | 37418427 ~ 37499161 (-) |
| AMCG00016957 | plxna1,LOC106572368 | coding | upstream | 339795 | 37535873 ~ 37569505 (-) |
| AMCG00016956 | plxna1,LOC104944641 | coding | upstream | 490937 | 37687015 ~ 37688235 (-) |
| AMCG00016958 | tpra1 | coding | upstream | 865995 | 38062073 ~ 38071943 (-) |
| AMCG00016964 | NA | coding | upstream | 895971 | 38092049 ~ 38114746 (-) |
| G16986 | NA | non-coding | downstream | 21599 | 37173881 ~ 37174163 (-) |
| G16979 | NA | non-coding | downstream | 486407 | 36709151 ~ 36709355 (-) |
| G16927 | NA | non-coding | downstream | 843584 | 36351953 ~ 36352178 (-) |
| G16893 | NA | non-coding | downstream | 1283677 | 35842930 ~ 35912085 (-) |
| G16858 | NA | non-coding | downstream | 1462458 | 35684703 ~ 35733304 (-) |
| G16992 | NA | non-coding | upstream | 45681 | 37241759 ~ 37337110 (-) |
| G17021 | NA | non-coding | upstream | 218036 | 37414114 ~ 37414810 (-) |
| G17033 | NA | non-coding | upstream | 619499 | 37815577 ~ 37816017 (-) |
| G17039 | NA | non-coding | upstream | 662246 | 37858324 ~ 37858524 (-) |
| G17094 | NA | non-coding | upstream | 893601 | 38089679 ~ 38117255 (-) |
| AMCG00016938 | NA | other | downstream | 1796732 | 35395992 ~ 35399030 (-) |
| G16563 | NA | other | downstream | 3087821 | 34106690 ~ 34107941 (-) |
| AMCG00016891 | limd2,LOC107674139,LOC107658411 | other | downstream | 3682183 | 33488725 ~ 33513579 (-) |
| AMCG00016889 | LOC107570748,LOC106906011 | other | downstream | 3761111 | 33391789 ~ 33434651 (-) |
| G16356 | fzd2,LOC107583044,LOC107658461,LOC107729561,LOC106607305,LOC106601035 | other | downstream | 4016879 | 33176076 ~ 33178883 (-) |
| G17032 | NA | other | upstream | 562079 | 37758157 ~ 37758471 (-) |
| AMCG00016959 | NA | other | upstream | 679172 | 37875250 ~ 38058939 (-) |
| G17421 | NA | other | upstream | 4020573 | 41216651 ~ 41217231 (-) |
| AMCG00017014 | NA | other | upstream | 4740848 | 41936926 ~ 41938563 (-) |
| G17842 | NA | other | upstream | 5612633 | 42808711 ~ 42864616 (-) |
