Gene
RNA
| Item | Value |
|---|---|
| gene id | G16992 |
| gene name | NA |
| gene type | non-coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030122.1 |
| NCBI id | CM030122.1 |
| chromosome length | 54868152 |
| location | 37241759 ~ 37337110 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU21073 | False | 435 | lncRNA | 0.43 | 2 | 37241759 | 37337110 |
| TU21074 | True | 458 | lncRNA | 0.43 | 2 | 37241759 | 37248603 |
| TU21075 | False | 361 | lncRNA | 0.44 | 2 | 37241759 | 37255791 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00016954 | txnrd3,LOC100702976,LOC106511133 | coding | downstream | 539777 | 36682750 ~ 36701982 (-) |
| AMCG00016953 | LOC107715024,LOC107664194,LOC102787184 | coding | downstream | 671748 | 36566281 ~ 36570011 (-) |
| AMCG00016952 | NA | coding | downstream | 962082 | 36252375 ~ 36279677 (-) |
| AMCG00016944 | lhfpl4,LOC107716887 | coding | downstream | 1516726 | 35724533 ~ 35725033 (-) |
| AMCG00016942 | NA | coding | downstream | 1756863 | 35457197 ~ 35484896 (-) |
| AMCG00016955 | plxna1,LOC106572368 | coding | upstream | 81317 | 37418427 ~ 37499161 (-) |
| AMCG00016957 | plxna1,LOC106572368 | coding | upstream | 198763 | 37535873 ~ 37569505 (-) |
| AMCG00016956 | plxna1,LOC104944641 | coding | upstream | 349905 | 37687015 ~ 37688235 (-) |
| AMCG00016958 | tpra1 | coding | upstream | 724963 | 38062073 ~ 38071943 (-) |
| AMCG00016964 | NA | coding | upstream | 754939 | 38092049 ~ 38114746 (-) |
| G16988 | NA | non-coding | downstream | 45681 | 37195762 ~ 37196078 (-) |
| G16986 | NA | non-coding | downstream | 67596 | 37173881 ~ 37174163 (-) |
| G16979 | NA | non-coding | downstream | 532404 | 36709151 ~ 36709355 (-) |
| G16927 | NA | non-coding | downstream | 889581 | 36351953 ~ 36352178 (-) |
| G16893 | NA | non-coding | downstream | 1329674 | 35842930 ~ 35912085 (-) |
| G17021 | NA | non-coding | upstream | 77004 | 37414114 ~ 37414810 (-) |
| G17033 | NA | non-coding | upstream | 478467 | 37815577 ~ 37816017 (-) |
| G17039 | NA | non-coding | upstream | 521214 | 37858324 ~ 37858524 (-) |
| G17094 | NA | non-coding | upstream | 752569 | 38089679 ~ 38117255 (-) |
| G17140 | NA | non-coding | upstream | 988140 | 38325250 ~ 38326037 (-) |
| AMCG00016938 | NA | other | downstream | 1842729 | 35395992 ~ 35399030 (-) |
| G16563 | NA | other | downstream | 3133818 | 34106690 ~ 34107941 (-) |
| AMCG00016891 | limd2,LOC107674139,LOC107658411 | other | downstream | 3728180 | 33488725 ~ 33513579 (-) |
| AMCG00016889 | LOC107570748,LOC106906011 | other | downstream | 3807108 | 33391789 ~ 33434651 (-) |
| G16356 | fzd2,LOC107583044,LOC107658461,LOC107729561,LOC106607305,LOC106601035 | other | downstream | 4062876 | 33176076 ~ 33178883 (-) |
| G17032 | NA | other | upstream | 421047 | 37758157 ~ 37758471 (-) |
| AMCG00016959 | NA | other | upstream | 538140 | 37875250 ~ 38058939 (-) |
| G17421 | NA | other | upstream | 3879541 | 41216651 ~ 41217231 (-) |
| AMCG00017014 | NA | other | upstream | 4599816 | 41936926 ~ 41938563 (-) |
| G17842 | NA | other | upstream | 5471601 | 42808711 ~ 42864616 (-) |
