Gene
RNA
| Item | Value |
|---|---|
| gene id | G17089 |
| gene name | NA |
| gene type | non-coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030122.1 |
| NCBI id | CM030122.1 |
| chromosome length | 54868152 |
| location | 38135173 ~ 38135840 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | description |
|---|---|
| ko04744 | Phototransduction |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU21183 | True | 668 | lncRNA | 0.49 | 1 | 38135173 | 38135840 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00016960 | NA | coding | upstream | 47637 | 38085290 ~ 38087536 (+) |
| AMCG00016951 | LOC105894324,LOC105023857,LOC106566981,LOC103373809 | coding | upstream | 1575192 | 36533936 ~ 36559981 (+) |
| AMCG00016950 | NA | coding | upstream | 1610542 | 36501049 ~ 36524631 (+) |
| AMCG00016949 | NA | coding | upstream | 1833280 | 36299372 ~ 36301893 (+) |
| AMCG00016947 | NA | coding | upstream | 1882958 | 36241389 ~ 36252215 (+) |
| AMCG00016966 | NA | coding | downstream | 186125 | 38321965 ~ 38336646 (+) |
| AMCG00016965 | NA | coding | downstream | 201805 | 38337645 ~ 38351463 (+) |
| AMCG00016970 | NA | coding | downstream | 259859 | 38395699 ~ 38399287 (+) |
| AMCG00016972 | mcm2,LOC106583719 | coding | downstream | 264890 | 38400730 ~ 38415204 (+) |
| AMCG00016975 | NA | coding | downstream | 312768 | 38448608 ~ 38454664 (+) |
| G17073 | NA | non-coding | upstream | 17918 | 38089801 ~ 38117255 (+) |
| G17064 | NA | non-coding | upstream | 42494 | 38062034 ~ 38092679 (+) |
| G17044 | NA | non-coding | upstream | 148516 | 37948232 ~ 37986657 (+) |
| G17006 | plxna1 | non-coding | upstream | 679772 | 37455176 ~ 37455401 (+) |
| G17005 | plxna1 | non-coding | upstream | 688747 | 37446172 ~ 37446426 (+) |
| G17165 | NA | non-coding | downstream | 255837 | 38391677 ~ 38392072 (+) |
| G17214 | NA | non-coding | downstream | 400221 | 38536061 ~ 38536333 (+) |
| G17221 | NA | non-coding | downstream | 489686 | 38625526 ~ 38626023 (+) |
| G17230 | NA | non-coding | downstream | 618681 | 38754521 ~ 38805946 (+) |
| G17274 | NA | non-coding | downstream | 943575 | 39079415 ~ 39079897 (+) |
| AMCG00016934 | acly,aclya,LOC103369716,LOC108273769 | other | upstream | 2930941 | 35158597 ~ 35204232 (+) |
| G16550 | NA | other | upstream | 4034310 | 34100315 ~ 34100863 (+) |
| AMCG00016909 | mien1,LOC107566883,LOC107755209 | other | upstream | 4035577 | 34093276 ~ 34099596 (+) |
| G16546 | NA | other | upstream | 4087453 | 34047371 ~ 34047720 (+) |
| AMCG00016901 | NA | other | upstream | 4460812 | 33668593 ~ 33674361 (+) |
| G17193 | NA | other | downstream | 360211 | 38496051 ~ 38503632 (+) |
| AMCG00016979 | NA | other | downstream | 1103233 | 39239073 ~ 39254490 (+) |
| G17697 | NA | other | downstream | 4255457 | 42391297 ~ 42397787 (+) |
| AMCG00017078 | LOC106565757 | other | downstream | 5990374 | 44126214 ~ 44137931 (+) |
| G18192 | NA | other | downstream | 6518812 | 44654652 ~ 44656098 (+) |
