G17214


Basic Information

Item Value
gene id G17214
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 38536061 ~ 38536333 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU21343
gaaaaccTGTGgtgggagctgaaggttcgagttgccaaacgtcagcctcgaaaccttaatgacttggagaggatctgcaaagaggagtgggacaaaatccctcctgagatgtgtgcaaacctggtggccaactacaagaaacgtctgacctctgtgattgccaacaagggttttgccaccaagtactaagtcgaaggggtcaaatacttatttccctcattaacatgcaaatcaatgtataacttttttgaaatgtgtttttctggatttttt

Function

GO: NA

KEGG:

id description
ko03050 Proteasome

RNA

RNA id representative length rna type GC content exon number start site end site
TU21343 True 273 lncRNA 0.43 1 38536061 38536333

Neighbor

gene id symbol gene type direction distance location
AMCG00016971 lsm3,LOC107562728,LOC107676354,LOC100705055 coding upstream 11284 38513220 ~ 38524777 (+)
AMCG00016973 NA coding upstream 44017 38479332 ~ 38492044 (+)
AMCG00016974 podxl2 coding upstream 64170 38468150 ~ 38471891 (+)
AMCG00016975 NA coding upstream 81397 38448608 ~ 38454664 (+)
AMCG00016972 mcm2,LOC106583719 coding upstream 120857 38400730 ~ 38415204 (+)
AMCG00016976 slc6a6,LOC106566182,LOC105006920 coding downstream 250017 38786350 ~ 38800821 (+)
AMCG00016981 NA coding downstream 734940 39271273 ~ 39294718 (+)
AMCG00016980 NA coding downstream 768947 39305280 ~ 39323121 (+)
AMCG00016983 NA coding downstream 838927 39375260 ~ 39396596 (+)
AMCG00016982 NA coding downstream 863424 39399757 ~ 39429289 (+)
G17165 NA non-coding upstream 143989 38391677 ~ 38392072 (+)
G17089 NA non-coding upstream 400221 38135173 ~ 38135840 (+)
G17073 NA non-coding upstream 418806 38089801 ~ 38117255 (+)
G17064 NA non-coding upstream 443382 38062034 ~ 38092679 (+)
G17044 NA non-coding upstream 549404 37948232 ~ 37986657 (+)
G17221 NA non-coding downstream 89193 38625526 ~ 38626023 (+)
G17230 NA non-coding downstream 218188 38754521 ~ 38805946 (+)
G17274 NA non-coding downstream 543082 39079415 ~ 39079897 (+)
G17361 NA non-coding downstream 1253756 39790089 ~ 39790567 (+)
G17381 NA non-coding downstream 1732092 40268425 ~ 40284772 (+)
G17193 NA other upstream 32429 38496051 ~ 38503632 (+)
AMCG00016934 acly,aclya,LOC103369716,LOC108273769 other upstream 3331829 35158597 ~ 35204232 (+)
G16550 NA other upstream 4435198 34100315 ~ 34100863 (+)
AMCG00016909 mien1,LOC107566883,LOC107755209 other upstream 4436465 34093276 ~ 34099596 (+)
G16546 NA other upstream 4488341 34047371 ~ 34047720 (+)
AMCG00016979 NA other downstream 702740 39239073 ~ 39254490 (+)
G17697 NA other downstream 3854964 42391297 ~ 42397787 (+)
AMCG00017078 LOC106565757 other downstream 5589881 44126214 ~ 44137931 (+)
G18192 NA other downstream 6118319 44654652 ~ 44656098 (+)
AMCG00017099 cav3,LOC107673475,LOC107749619,LOC107584510,LOC107577493 other downstream 6412701 44949034 ~ 44961601 (+)

Expression


Co-expression Network