G17221


Basic Information

Item Value
gene id G17221
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 38625526 ~ 38626023 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU21350
cagaaaaatgcatttcaaaaaagttatacattgatttgcatgttaatgagggaaataagtatttagcccctttgacttagtacttggtggcaaaacccttgttggcaatcacagagggtcagacgtttcttgtagttggccaccaggtttgcacacatctcaggagggattttgtcccactcctctttgcagatcctctccaagtcattaaggtttcgaggctgacatttggcaactcttgttgcttcttcttgagccactcctttgttgccttggctgtgtgttttgggtcattgtcatgctggaatacccatccacgacccattttcaatgccctggctgagggaaggaggttctcacccaagatttgacggtacatggccccgtccatcgtccctttgatgcggtgcagttgtcctgtccccttggcgagttgagttgatgccaaagagctcaattttggtctcatctgaccactacactttcacccagttctcc

Function

NR:

description
PREDICTED: leukocyte elastase inhibitor-like isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU21350 True 498 lncRNA 0.47 1 38625526 38626023

Neighbor

gene id symbol gene type direction distance location
AMCG00016971 lsm3,LOC107562728,LOC107676354,LOC100705055 coding upstream 100749 38513220 ~ 38524777 (+)
AMCG00016973 NA coding upstream 133482 38479332 ~ 38492044 (+)
AMCG00016974 podxl2 coding upstream 153635 38468150 ~ 38471891 (+)
AMCG00016975 NA coding upstream 170862 38448608 ~ 38454664 (+)
AMCG00016972 mcm2,LOC106583719 coding upstream 210322 38400730 ~ 38415204 (+)
AMCG00016976 slc6a6,LOC106566182,LOC105006920 coding downstream 160327 38786350 ~ 38800821 (+)
AMCG00016981 NA coding downstream 645250 39271273 ~ 39294718 (+)
AMCG00016980 NA coding downstream 679257 39305280 ~ 39323121 (+)
AMCG00016983 NA coding downstream 749237 39375260 ~ 39396596 (+)
AMCG00016982 NA coding downstream 773734 39399757 ~ 39429289 (+)
G17214 NA non-coding upstream 89193 38536061 ~ 38536333 (+)
G17165 NA non-coding upstream 233454 38391677 ~ 38392072 (+)
G17089 NA non-coding upstream 489686 38135173 ~ 38135840 (+)
G17073 NA non-coding upstream 508271 38089801 ~ 38117255 (+)
G17064 NA non-coding upstream 532847 38062034 ~ 38092679 (+)
G17230 NA non-coding downstream 128498 38754521 ~ 38805946 (+)
G17274 NA non-coding downstream 453392 39079415 ~ 39079897 (+)
G17361 NA non-coding downstream 1164066 39790089 ~ 39790567 (+)
G17381 NA non-coding downstream 1642402 40268425 ~ 40284772 (+)
G17419 NA non-coding downstream 2590472 41216495 ~ 41216809 (+)
G17193 NA other upstream 121894 38496051 ~ 38503632 (+)
AMCG00016934 acly,aclya,LOC103369716,LOC108273769 other upstream 3421294 35158597 ~ 35204232 (+)
G16550 NA other upstream 4524663 34100315 ~ 34100863 (+)
AMCG00016909 mien1,LOC107566883,LOC107755209 other upstream 4525930 34093276 ~ 34099596 (+)
G16546 NA other upstream 4577806 34047371 ~ 34047720 (+)
AMCG00016979 NA other downstream 613050 39239073 ~ 39254490 (+)
G17697 NA other downstream 3765274 42391297 ~ 42397787 (+)
AMCG00017078 LOC106565757 other downstream 5500191 44126214 ~ 44137931 (+)
G18192 NA other downstream 6028629 44654652 ~ 44656098 (+)
AMCG00017099 cav3,LOC107673475,LOC107749619,LOC107584510,LOC107577493 other downstream 6323011 44949034 ~ 44961601 (+)

Expression


Co-expression Network