G17274


Basic Information

Item Value
gene id G17274
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 39079415 ~ 39079897 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU21428
AGCCAAGGCAACAATGGAGTGggtcaagaagaagcacattaaggtcctggagtgccTTGCCAGTCtgcagaccttaatcccatagaaaatctgtggagggagctgaaggttcgagttgccaaacgtcagcctcgaaaccttaatgacttggagaggatctgcaaagagaagtgggacaaaatccctcctgagatgtgtgcaaacctggtggccaactacaagaaacgtctgacctctgtgattgccaacaagggttttgccaccaagtactaagtcgaaggggtcaaatacttatttccctcattaacatgcaaatcaatttataactttttttgaaatgcgtttttctggatttttttgttgttattctgtctctcactgttaaaatacacctaccattaaaattgtagactgataatttctttgtcagtgggtaaacgtacaaaatcagcaggggatcaaatacttttttccctcactgta

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU21428 True 483 lncRNA 0.42 1 39079415 39079897

Neighbor

gene id symbol gene type direction distance location
AMCG00016976 slc6a6,LOC106566182,LOC105006920 coding upstream 278594 38786350 ~ 38800821 (+)
AMCG00016971 lsm3,LOC107562728,LOC107676354,LOC100705055 coding upstream 554638 38513220 ~ 38524777 (+)
AMCG00016973 NA coding upstream 587371 38479332 ~ 38492044 (+)
AMCG00016974 podxl2 coding upstream 607524 38468150 ~ 38471891 (+)
AMCG00016975 NA coding upstream 624751 38448608 ~ 38454664 (+)
AMCG00016981 NA coding downstream 191376 39271273 ~ 39294718 (+)
AMCG00016980 NA coding downstream 225383 39305280 ~ 39323121 (+)
AMCG00016983 NA coding downstream 295363 39375260 ~ 39396596 (+)
AMCG00016982 NA coding downstream 319860 39399757 ~ 39429289 (+)
AMCG00016984 dock3 coding downstream 589303 39669200 ~ 39788816 (+)
G17230 NA non-coding upstream 273469 38754521 ~ 38805946 (+)
G17221 NA non-coding upstream 453392 38625526 ~ 38626023 (+)
G17214 NA non-coding upstream 543082 38536061 ~ 38536333 (+)
G17165 NA non-coding upstream 687343 38391677 ~ 38392072 (+)
G17089 NA non-coding upstream 943575 38135173 ~ 38135840 (+)
G17361 NA non-coding downstream 710192 39790089 ~ 39790567 (+)
G17381 NA non-coding downstream 1188528 40268425 ~ 40284772 (+)
G17419 NA non-coding downstream 2136598 41216495 ~ 41216809 (+)
G17424 NA non-coding downstream 2165405 41245302 ~ 41245519 (+)
G17482 NA non-coding downstream 2522051 41601948 ~ 41605391 (+)
G17193 NA other upstream 575783 38496051 ~ 38503632 (+)
AMCG00016934 acly,aclya,LOC103369716,LOC108273769 other upstream 3875183 35158597 ~ 35204232 (+)
G16550 NA other upstream 4978552 34100315 ~ 34100863 (+)
AMCG00016909 mien1,LOC107566883,LOC107755209 other upstream 4979819 34093276 ~ 34099596 (+)
G16546 NA other upstream 5031695 34047371 ~ 34047720 (+)
AMCG00016979 NA other downstream 159176 39239073 ~ 39254490 (+)
G17697 NA other downstream 3311400 42391297 ~ 42397787 (+)
AMCG00017078 LOC106565757 other downstream 5046317 44126214 ~ 44137931 (+)
G18192 NA other downstream 5574755 44654652 ~ 44656098 (+)
AMCG00017099 cav3,LOC107673475,LOC107749619,LOC107584510,LOC107577493 other downstream 5869137 44949034 ~ 44961601 (+)

Expression


Co-expression Network