G17361


Basic Information

Item Value
gene id G17361
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 39790089 ~ 39790567 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU21543
ggggagcgaaggctggcccgtgtggtccgatccaacagacgagctactgtagctcaaattgctgaaaaagtgaatgctggttctgatagaaaggtgtcagaacacacagtgcatcgcagtttgttgcgtatggggctgcgtagccacagaccagtcagggtgcccatgctgacccctgtccactgccgaaagtgcctacaatgggcattaaaaatgatgaatcacaagttcaaggtgttgatttggcctccaaattccccagatctcaatccaatcgagcatctgtgggatgtgctggacgaacaagtccgatccatggaggccccacctcgcaactgctaatgtcttggtgccagataccacagcacaccttcagaggtctagtggagtccatgcctcgacgggtcagggctgttttggcggcaaaagggggacctacacaatattaggcaggtggtcataatgttatggctgatcgg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU21543 True 479 lncRNA 0.52 1 39790089 39790567

Neighbor

gene id symbol gene type direction distance location
AMCG00016984 dock3 coding upstream 1273 39669200 ~ 39788816 (+)
AMCG00016982 NA coding upstream 360800 39399757 ~ 39429289 (+)
AMCG00016983 NA coding upstream 393493 39375260 ~ 39396596 (+)
AMCG00016980 NA coding upstream 466968 39305280 ~ 39323121 (+)
AMCG00016981 NA coding upstream 495371 39271273 ~ 39294718 (+)
AMCG00016985 manf,LOC106583751,LOC102787989 coding downstream 366 39790933 ~ 39797563 (+)
AMCG00016986 NA coding downstream 7568 39798135 ~ 39800651 (+)
AMCG00016988 NA coding downstream 475374 40265941 ~ 40280387 (+)
AMCG00016989 NA coding downstream 653363 40443930 ~ 40460889 (+)
AMCG00016995 NA coding downstream 1612190 41402757 ~ 41426060 (+)
G17274 NA non-coding upstream 710192 39079415 ~ 39079897 (+)
G17230 NA non-coding upstream 984143 38754521 ~ 38805946 (+)
G17221 NA non-coding upstream 1164066 38625526 ~ 38626023 (+)
G17214 NA non-coding upstream 1253756 38536061 ~ 38536333 (+)
G17165 NA non-coding upstream 1398017 38391677 ~ 38392072 (+)
G17381 NA non-coding downstream 477858 40268425 ~ 40284772 (+)
G17419 NA non-coding downstream 1425928 41216495 ~ 41216809 (+)
G17424 NA non-coding downstream 1454735 41245302 ~ 41245519 (+)
G17482 NA non-coding downstream 1811381 41601948 ~ 41605391 (+)
G17491 NA non-coding downstream 1880811 41671378 ~ 41673353 (+)
AMCG00016979 NA other upstream 535599 39239073 ~ 39254490 (+)
G17193 NA other upstream 1286457 38496051 ~ 38503632 (+)
AMCG00016934 acly,aclya,LOC103369716,LOC108273769 other upstream 4585857 35158597 ~ 35204232 (+)
G16550 NA other upstream 5689226 34100315 ~ 34100863 (+)
AMCG00016909 mien1,LOC107566883,LOC107755209 other upstream 5690493 34093276 ~ 34099596 (+)
G17697 NA other downstream 2600730 42391297 ~ 42397787 (+)
AMCG00017078 LOC106565757 other downstream 4335647 44126214 ~ 44137931 (+)
G18192 NA other downstream 4864085 44654652 ~ 44656098 (+)
AMCG00017099 cav3,LOC107673475,LOC107749619,LOC107584510,LOC107577493 other downstream 5158467 44949034 ~ 44961601 (+)
AMCG00017167 NA other downstream 9581455 49372022 ~ 49382218 (+)

Expression


Co-expression Network