G17383


Basic Information

Item Value
gene id G17383
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 40264597 ~ 40266261 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU21573
CTTCACTGTACTGCTGTGGGTGTCTGCGGTTTCCGTGGGAACCTTCATCTGGAACACCCTGCCCACCACGGCAGAGGAGTCTGGGATACCAGCAGGCAGTACAACTGCTGCTGCGTTGACACTCTCCTGCAGATCTGTGAGCACTGCCGACTGCATCGATGCCTCCAGCTGGCTGCCCAAGTCCCGCACTACCTCCACCTGCCCGTCAGGCCAGTTGCCATGGACAACTGCTACCAGCAGCCCCATTATTAGAAAGGTAGTCCTGCCGGGAGCCAGCTGATAAGCCCCGGCCTCCACGCAGGCTCTCCGTTTATTGAGCATTGTTTTATCggttctctctctcgctctctcaccgAAGGGGACACGCCCAGATCAGCGGCAGCATGCACTGCTGTCCCGATGCCTTTTTACAaccactttttttctcttcttctcgCTCGTTCGCTCTGTCTCAGCGTCGCTTCCCAGCTTTTTCCAGATTCACAATCCCATTGTTAGCCAGTGTCACTTAGGCTCCTGCTGGTGTCCTTCCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU21573 True 533 lncRNA 0.56 2 40264597 40266261

Neighbor

gene id symbol gene type direction distance location
AMCG00016987 pcbp4,LOC108436686,LOC107677040,LOC107708490,LOC107567193 coding downstream 409483 39827240 ~ 39855114 (-)
AMCG00016978 sec13,LOC107557974 coding downstream 1026698 39218824 ~ 39237899 (-)
AMCG00016977 LOC108436697 coding downstream 1371078 38822108 ~ 38893519 (-)
AMCG00016969 NA coding downstream 1750830 38506156 ~ 38513767 (-)
AMCG00016968 NA coding downstream 1893347 38360534 ~ 38371250 (-)
AMCG00016992 LOC105913228,LOC107691887,LOC107701594,LOC108431596,LOC100331190,LOC107592839 coding upstream 622098 40888359 ~ 40888580 (-)
AMCG00016990 LOC103368898 coding upstream 723005 40989266 ~ 40990660 (-)
AMCG00016991 LOC103386478,LOC108431596,LOC103131950,LOC102219775,LOC106954144,LOC106583731 coding upstream 771091 41037352 ~ 41038674 (-)
AMCG00016993 LOC106583731,LOC105007334,LOC107661916 coding upstream 840430 41106691 ~ 41108161 (-)
AMCG00016999 NA coding upstream 1262395 41528656 ~ 41530149 (-)
G17364 NA non-coding downstream 463757 39794975 ~ 39800840 (-)
G17325 NA non-coding downstream 867742 39394493 ~ 39396855 (-)
G17294 NA non-coding downstream 960974 39301446 ~ 39303623 (-)
G17277 NA non-coding downstream 1150208 39114141 ~ 39114389 (-)
G17275 NA non-coding downstream 1184705 39079415 ~ 39079892 (-)
G17384 NA non-coding upstream 14277 40280538 ~ 40284823 (-)
G17414 NA non-coding upstream 607111 40873372 ~ 40878065 (-)
G17423 NA non-coding upstream 978665 41244926 ~ 41245225 (-)
G17505 NA non-coding upstream 1335663 41601924 ~ 41605395 (-)
G17755 NA non-coding upstream 2278099 42544360 ~ 42549418 (-)
AMCG00016959 NA other downstream 2205658 37875250 ~ 38058939 (-)
G17032 NA other downstream 2506126 37758157 ~ 37758471 (-)
AMCG00016938 NA other downstream 4865567 35395992 ~ 35399030 (-)
G16563 NA other downstream 6156656 34106690 ~ 34107941 (-)
AMCG00016891 limd2,LOC107674139,LOC107658411 other downstream 6751018 33488725 ~ 33513579 (-)
G17421 NA other upstream 950390 41216651 ~ 41217231 (-)
AMCG00017014 NA other upstream 1670665 41936926 ~ 41938563 (-)
G17842 NA other upstream 2542450 42808711 ~ 42864616 (-)
AMCG00017051 NA other upstream 2682730 42948991 ~ 42974433 (-)
AMCG00017061 NA other upstream 3013976 43280237 ~ 43286603 (-)

Expression


Co-expression Network