G17424


Basic Information

Item Value
gene id G17424
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 41245302 ~ 41245519 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU21622
tcagcatgggcaccctgactggtctgcggctacgcagccccatacgcaacaaactgcgatgcactgtgtgttctgacacctttctatcagaaccagcattaactttttcagcaatttgagctacagtagctcgtctgttggatcggaccacacgggccagccttcactccccacgtgcatcaatgagccttggccacccatgaccctgtcgccagttc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU21622 True 218 lncRNA 0.55 1 41245302 41245519

Neighbor

gene id symbol gene type direction distance location
AMCG00016989 NA coding upstream 784413 40443930 ~ 40460889 (+)
AMCG00016988 NA coding upstream 964915 40265941 ~ 40280387 (+)
AMCG00016986 NA coding upstream 1444651 39798135 ~ 39800651 (+)
AMCG00016985 manf,LOC106583751,LOC102787989 coding upstream 1447739 39790933 ~ 39797563 (+)
AMCG00016984 dock3 coding upstream 1456486 39669200 ~ 39788816 (+)
AMCG00016995 NA coding downstream 157238 41402757 ~ 41426060 (+)
AMCG00016994 NA coding downstream 188173 41433692 ~ 41446610 (+)
AMCG00016998 rnf123 coding downstream 204736 41450255 ~ 41457202 (+)
AMCG00016997 rnf123,LOC102204603 coding downstream 212853 41458372 ~ 41464821 (+)
AMCG00016996 rnf123,LOC107661915,LOC107726274 coding downstream 231047 41476566 ~ 41496271 (+)
G17419 NA non-coding upstream 28493 41216495 ~ 41216809 (+)
G17381 NA non-coding upstream 960530 40268425 ~ 40284772 (+)
G17361 NA non-coding upstream 1454735 39790089 ~ 39790567 (+)
G17274 NA non-coding upstream 2165405 39079415 ~ 39079897 (+)
G17230 NA non-coding upstream 2439356 38754521 ~ 38805946 (+)
G17482 NA non-coding downstream 356429 41601948 ~ 41605391 (+)
G17491 NA non-coding downstream 425859 41671378 ~ 41673353 (+)
G17498 NA non-coding downstream 442491 41688010 ~ 41690199 (+)
G17514 NA non-coding downstream 468291 41713810 ~ 41716989 (+)
G17518 NA non-coding downstream 496831 41742350 ~ 41742773 (+)
AMCG00016979 NA other upstream 1990812 39239073 ~ 39254490 (+)
G17193 NA other upstream 2741670 38496051 ~ 38503632 (+)
AMCG00016934 acly,aclya,LOC103369716,LOC108273769 other upstream 6041070 35158597 ~ 35204232 (+)
G16550 NA other upstream 7144439 34100315 ~ 34100863 (+)
AMCG00016909 mien1,LOC107566883,LOC107755209 other upstream 7145706 34093276 ~ 34099596 (+)
G17697 NA other downstream 1145778 42391297 ~ 42397787 (+)
AMCG00017078 LOC106565757 other downstream 2880695 44126214 ~ 44137931 (+)
G18192 NA other downstream 3409133 44654652 ~ 44656098 (+)
AMCG00017099 cav3,LOC107673475,LOC107749619,LOC107584510,LOC107577493 other downstream 3703515 44949034 ~ 44961601 (+)
AMCG00017167 NA other downstream 8126503 49372022 ~ 49382218 (+)

Expression


Co-expression Network