G17909


Basic Information

Item Value
gene id G17909
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 43235820 ~ 43236036 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU22213
ttggataatattcagttgttggccgacacctggcagatgaaattcaatgtggacaagtgcaaggtattacatgcaggtaacaaaaatgtccactataattacactatgggaggaatagaactagatgaagtaatgcatgagaaagacctaggagtctatgtggactcctcactttctccatccaaacaatgtgtggaagcaataaaaaagtcaaaca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU22213 True 217 lncRNA 0.39 1 43235820 43236036

Neighbor

gene id symbol gene type direction distance location
AMCG00017054 NA coding upstream 111417 43118218 ~ 43124403 (+)
AMCG00017053 NA coding upstream 138305 43095638 ~ 43097515 (+)
AMCG00017042 NA coding upstream 383526 42850719 ~ 42852294 (+)
AMCG00017045 NA coding upstream 386154 42845705 ~ 42849666 (+)
AMCG00017046 ift122 coding upstream 391509 42820792 ~ 42844311 (+)
AMCG00017056 NA coding downstream 72659 43308695 ~ 43314951 (+)
AMCG00017055 NA coding downstream 81654 43317690 ~ 43319313 (+)
AMCG00017066 NA coding downstream 129791 43365827 ~ 43369383 (+)
AMCG00017065 NA coding downstream 135622 43371658 ~ 43384849 (+)
AMCG00017076 lrrn1,LOC102780565 coding downstream 308618 43544654 ~ 43546804 (+)
G17882 NA non-coding upstream 123184 43053086 ~ 43112636 (+)
G17580 NA non-coding upstream 1257154 41976395 ~ 41978666 (+)
G17518 NA non-coding upstream 1493047 41742350 ~ 41742773 (+)
G17514 NA non-coding upstream 1518831 41713810 ~ 41716989 (+)
G17498 NA non-coding upstream 1545621 41688010 ~ 41690199 (+)
G17969 NA non-coding downstream 158257 43394293 ~ 43394499 (+)
G17988 NA non-coding downstream 234034 43470070 ~ 43470846 (+)
G17987 LOC107575789 non-coding downstream 264134 43500170 ~ 43500476 (+)
G18077 NA non-coding downstream 865990 44102026 ~ 44103399 (+)
G18084 NA non-coding downstream 880930 44116966 ~ 44201038 (+)
G17697 NA other upstream 838033 42391297 ~ 42397787 (+)
AMCG00016979 NA other upstream 3981330 39239073 ~ 39254490 (+)
G17193 NA other upstream 4732188 38496051 ~ 38503632 (+)
AMCG00016934 acly,aclya,LOC103369716,LOC108273769 other upstream 8031588 35158597 ~ 35204232 (+)
G16550 NA other upstream 9134957 34100315 ~ 34100863 (+)
AMCG00017078 LOC106565757 other downstream 890178 44126214 ~ 44137931 (+)
G18192 NA other downstream 1418616 44654652 ~ 44656098 (+)
AMCG00017099 cav3,LOC107673475,LOC107749619,LOC107584510,LOC107577493 other downstream 1712998 44949034 ~ 44961601 (+)
AMCG00017167 NA other downstream 6135986 49372022 ~ 49382218 (+)
AMCG00017173 NA other downstream 6166495 49402531 ~ 49403845 (+)

Expression


Co-expression Network