G17969


Basic Information

Item Value
gene id G17969
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 43394293 ~ 43394499 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU22284
CTGCGCTCTTGGTCAGTTTGTGGGTTGGTGAGGGGGGTTAACAGCCACGTCTTTAGTGGATAACCGCGGTCTCCTGATGGGCAGTTGAATAattaaacagcaaaaacaataataaaaataaaattaaatagaaccataactttaaatgcatcactcACCAAGAAGCCACCCATCGCGCACCCTGCCAGCTTGGAGCCTCATCCCAAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU22284 True 207 lncRNA 0.45 1 43394293 43394499

Neighbor

gene id symbol gene type direction distance location
AMCG00017065 NA coding upstream 9444 43371658 ~ 43384849 (+)
AMCG00017066 NA coding upstream 24910 43365827 ~ 43369383 (+)
AMCG00017055 NA coding upstream 74980 43317690 ~ 43319313 (+)
AMCG00017056 NA coding upstream 79342 43308695 ~ 43314951 (+)
AMCG00017054 NA coding upstream 269890 43118218 ~ 43124403 (+)
AMCG00017076 lrrn1,LOC102780565 coding downstream 150155 43544654 ~ 43546804 (+)
AMCG00017073 NA coding downstream 293561 43688060 ~ 43731559 (+)
AMCG00017072 itpr1,LOC102304252,LOC102779610,LOC102203222 coding downstream 374359 43768858 ~ 43773452 (+)
AMCG00017071 LOC102304252 coding downstream 386925 43781424 ~ 43795570 (+)
AMCG00017068 NA coding downstream 412465 43806964 ~ 43814318 (+)
G17909 NA non-coding upstream 158257 43235820 ~ 43236036 (+)
G17882 NA non-coding upstream 281657 43053086 ~ 43112636 (+)
G17580 NA non-coding upstream 1415627 41976395 ~ 41978666 (+)
G17518 NA non-coding upstream 1651520 41742350 ~ 41742773 (+)
G17514 NA non-coding upstream 1677304 41713810 ~ 41716989 (+)
G17988 NA non-coding downstream 75571 43470070 ~ 43470846 (+)
G17987 LOC107575789 non-coding downstream 105671 43500170 ~ 43500476 (+)
G18077 NA non-coding downstream 707527 44102026 ~ 44103399 (+)
G18084 NA non-coding downstream 722467 44116966 ~ 44201038 (+)
G18125 NA non-coding downstream 982494 44376993 ~ 44377228 (+)
G17697 NA other upstream 996506 42391297 ~ 42397787 (+)
AMCG00016979 NA other upstream 4139803 39239073 ~ 39254490 (+)
G17193 NA other upstream 4890661 38496051 ~ 38503632 (+)
AMCG00016934 acly,aclya,LOC103369716,LOC108273769 other upstream 8190061 35158597 ~ 35204232 (+)
G16550 NA other upstream 9293430 34100315 ~ 34100863 (+)
AMCG00017078 LOC106565757 other downstream 731715 44126214 ~ 44137931 (+)
G18192 NA other downstream 1260153 44654652 ~ 44656098 (+)
AMCG00017099 cav3,LOC107673475,LOC107749619,LOC107584510,LOC107577493 other downstream 1554535 44949034 ~ 44961601 (+)
AMCG00017167 NA other downstream 5977523 49372022 ~ 49382218 (+)
AMCG00017173 NA other downstream 6008032 49402531 ~ 49403845 (+)

Expression


Co-expression Network