Gene
RNA
| Item | Value |
|---|---|
| gene id | G18077 |
| gene name | NA |
| gene type | non-coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030122.1 |
| NCBI id | CM030122.1 |
| chromosome length | 54868152 |
| location | 44102026 ~ 44103399 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU22414 | True | 816 | lncRNA | 0.42 | 2 | 44102026 | 44103399 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00017070 | edem1,LOC102794187 | coding | upstream | 246702 | 43843414 ~ 43855324 (+) |
| AMCG00017069 | arl8ba,arl8b,LOC107095653,LOC103137213,LOC107552649 | coding | upstream | 260436 | 43825329 ~ 43841590 (+) |
| AMCG00017068 | NA | coding | upstream | 287708 | 43806964 ~ 43814318 (+) |
| AMCG00017071 | LOC102304252 | coding | upstream | 306456 | 43781424 ~ 43795570 (+) |
| AMCG00017072 | itpr1,LOC102304252,LOC102779610,LOC102203222 | coding | upstream | 328574 | 43768858 ~ 43773452 (+) |
| AMCG00017079 | NA | coding | downstream | 43313 | 44146712 ~ 44160471 (+) |
| AMCG00017080 | camkv,LOC106582757 | coding | downstream | 261207 | 44364606 ~ 44371508 (+) |
| AMCG00017081 | NA | coding | downstream | 269489 | 44372888 ~ 44385986 (+) |
| AMCG00017082 | NA | coding | downstream | 285513 | 44388912 ~ 44411339 (+) |
| AMCG00017083 | NA | coding | downstream | 342222 | 44445621 ~ 44453494 (+) |
| G17987 | LOC107575789 | non-coding | upstream | 601550 | 43500170 ~ 43500476 (+) |
| G17988 | NA | non-coding | upstream | 631180 | 43470070 ~ 43470846 (+) |
| G17969 | NA | non-coding | upstream | 707527 | 43394293 ~ 43394499 (+) |
| G17909 | NA | non-coding | upstream | 865990 | 43235820 ~ 43236036 (+) |
| G17882 | NA | non-coding | upstream | 989390 | 43053086 ~ 43112636 (+) |
| G18084 | NA | non-coding | downstream | 13567 | 44116966 ~ 44201038 (+) |
| G18125 | NA | non-coding | downstream | 273594 | 44376993 ~ 44377228 (+) |
| G18127 | NA | non-coding | downstream | 284044 | 44387443 ~ 44387949 (+) |
| G18186 | NA | non-coding | downstream | 519968 | 44623367 ~ 44714164 (+) |
| G18196 | usp4 | non-coding | downstream | 566024 | 44669423 ~ 44670878 (+) |
| G17697 | NA | other | upstream | 1704239 | 42391297 ~ 42397787 (+) |
| AMCG00016979 | NA | other | upstream | 4847536 | 39239073 ~ 39254490 (+) |
| G17193 | NA | other | upstream | 5598394 | 38496051 ~ 38503632 (+) |
| AMCG00016934 | acly,aclya,LOC103369716,LOC108273769 | other | upstream | 8897794 | 35158597 ~ 35204232 (+) |
| G16550 | NA | other | upstream | 10001163 | 34100315 ~ 34100863 (+) |
| AMCG00017078 | LOC106565757 | other | downstream | 22815 | 44126214 ~ 44137931 (+) |
| G18192 | NA | other | downstream | 551253 | 44654652 ~ 44656098 (+) |
| AMCG00017099 | cav3,LOC107673475,LOC107749619,LOC107584510,LOC107577493 | other | downstream | 845635 | 44949034 ~ 44961601 (+) |
| AMCG00017167 | NA | other | downstream | 5268623 | 49372022 ~ 49382218 (+) |
| AMCG00017173 | NA | other | downstream | 5299132 | 49402531 ~ 49403845 (+) |
