G18101


Basic Information

Item Value
gene id G18101
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 44136188 ~ 44138542 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU22443
GaacactttttaataatgtgaaataatgacTATCCATGTATAACAGCTCttgaatttctgttttaaagtctGAATAGCAAAACTAGGCttgaaataataaacagtgTTAAGGAATAAATACAGGTCCCCCTATTGTTTCCAGTGATGTCAAGTGCAGCTGTAACAACAGGGATTACTTTACCCCACCTACTGAATATAGTACTACATTGCCATGTGCCATACTATATACTTGcattcttgttttattgatttattttgtttattaataggAAAACAAGTAAGATTGCAACATAAAATAGCATTTTCAACAGAGTGCCATGTGAtagtacaacaaatactaataaacagttacaaaaacagatttttgcAGGTCATATTTGGCTAGTttataaaacatcacaaaatggCACAATTCAGCCTATACTAATGTTCAACAGTTACAGGGGagattttacaGTTAAACAAGGAAACTATTCCCCAAATAAAGTTTCCttggctattttttttttttaaagtggattAAATCTCACAAATGAATCAactattgtattgctttttaagtATGAAAATAGGTATTTTTATATCcatgcaaaactttttttttttttaatctcaccATGTAGtctctataaaaaaaatgtttaagcaTCAATTCAGAAGACAGACAACTTTGAAACCAAGGCAATCATTATtagcttttgcttttattattattgttacagcTTCTACTTTTGGTGCTACAGTAGTAAATGATGTCATTAGCACAATTAATGTCATAGTGAAAAAGCTGGGGAAATTAAGGTGGAATGTTTGCTCAACAGAATCCACATTTTTCTACAAAGGTTTATTTGATGCAATTAAAACTGTAGCAAATTTCCttagtgttaaaataaacagtaaacacTTGTTTGCTATATAGATAACGAGAAAAGGACTGAAAATGGTACAGatactgtttttgttcttcatgattaaaaaataaataaaacatcttccTTGAGAGGATTTAatcacaattgtttttaaaaataataagctgttcaatatatttttaaaatgtcaagcaGATCTCCTAACCTACATCAAAGATGACAAACCGTTACAATAAAGACAGAATGAAGtgtcaaatacatttacagttttaataaaagtaatcCTTTAATCACAGTCAGAAGGTCACTGGAATAGATGGCCTCTGTGAATTTCTCTAGGAATCAGCAGCCCATTTGTGTACTTCTCCAATACTCACCACTAAATAGCTACATTCATtggaatgcattaaaaaaaataaagacaatgcaTTTGCATTCCCATTACATCCCACTATATATTAGaaccaagttaaaaaaaacaaaaatcacccaCGCCAAAAAGAAAAGTACACAAGCTATTAGAGTACAGTACAcatttaacaaaactaaaagaacTGTGGGCTTATACGTTATCTTCTGAGTGAACACATGTTATTTCAGTTACTTGTACAGCAACAAGAGCTTCAATTCATCTCATGTTTGCCACCCTGATGTCACATGCAAGTACAATATTTTTAAGTGTGGCAAAGTTtgcaattttaattggttaaacATACAAATTGTATCATTGGTTACATACAGGTGCAAATAAACATGATCCTTGAAGTCTGGTTTCAATTAGCAATGTTACATGAGGTCCCCCACCATAGATCATGGCATGTGGACAAAAGGAACAGTGATGACGTGTATATCTAGATACTGAACTGTGCTGCAAACTTGAGTTGAAGCTGAATATTTATAGCTGAGCTATAATCATTAATATTAGAGCAGACAATTTTCCTAAGCCACAGATCACGACAGGATAATCAAAATCATGATCCTCTTGTGCTTGTTATACCAGGGGGTAAGAGGCCAATTGATTTATTAACAACTGGAAGTACATTAGGCCAGTAGATCGcaggtcatttaaaaaacataaattatttttaattcaattaaaatcttTTCCAGTAAAGCAGAATTTATAAAGCTAAGCACTGAAGAACAGAGGTGgaaacatttaaagttaaacTACTTCCTTTTAGTATTGCATATTCATTAATTGGTTAGAATAACAAATAACATCTGTCTCTGGTTTTCTCAGCTTGATGGTTAGCTTCTATGAAACCAGAGAGTTTGTTACAGGGTCAGTATGTCTGTGGACTGAGAATAAAGAGACGGTCCTCCTCCTTCCGAATCCACTTCAGCAGCTTGTTAATGGTTGCCACAGCCAGGGCTTTGGTCCCCAAAGGACTGAAGCATAGGTAGAGCTCGAAGCCACTGGTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU22443 True 2297 lncRNA 0.33 2 44136188 44138542

Neighbor

gene id symbol gene type direction distance location
AMCG00017077 NA coding downstream 10279 44102018 ~ 44125909 (-)
AMCG00017074 LOC103360486 coding downstream 222765 43881278 ~ 43913423 (-)
AMCG00017075 gnat1,LOC108271583,LOC108231337,LOC108424115,LOC103133111,LOC102214189,LOC100706288,LOC102793896 coding downstream 264093 43857493 ~ 43872095 (-)
AMCG00017059 crbn coding downstream 771319 43344470 ~ 43364869 (-)
AMCG00017057 NA coding downstream 834380 43297944 ~ 43301808 (-)
AMCG00017085 NA coding upstream 318236 44456778 ~ 44458554 (-)
AMCG00017086 gnai2b,LOC108271854,LOC107723915,LOC107587570,LOC107696468,LOC107595419 coding upstream 345069 44483611 ~ 44503250 (-)
AMCG00017087 NA coding upstream 427378 44565920 ~ 44566162 (-)
AMCG00017089 NA coding upstream 434982 44573524 ~ 44600280 (-)
AMCG00017094 NA coding upstream 495030 44633572 ~ 44634705 (-)
G18066 NA non-coding downstream 244281 43837177 ~ 43891907 (-)
G18015 NA non-coding downstream 502766 43633221 ~ 43633422 (-)
G17910 NA non-coding downstream 900152 43235805 ~ 43236036 (-)
G17754 NA non-coding downstream 1584415 42550325 ~ 42551773 (-)
G17755 NA non-coding downstream 1586770 42544360 ~ 42549418 (-)
G18156 NA non-coding upstream 238455 44376997 ~ 44377221 (-)
G18164 NA non-coding upstream 248901 44387443 ~ 44387995 (-)
G18219 NA non-coding upstream 660912 44799454 ~ 44829026 (-)
G18352 NA non-coding upstream 1714520 45853062 ~ 45916620 (-)
G18364 NA non-coding upstream 1963418 46101960 ~ 46102188 (-)
AMCG00017067 sumf1 other downstream 476586 43633770 ~ 43659602 (-)
AMCG00017060 NA other downstream 827562 43305697 ~ 43308626 (-)
AMCG00017061 NA other downstream 849585 43280237 ~ 43286603 (-)
AMCG00017051 NA other downstream 1161755 42948991 ~ 42974433 (-)
G17842 NA other downstream 1271572 42808711 ~ 42864616 (-)
AMCG00017091 brk1,BRK1,LOC106565571 other upstream 514913 44653455 ~ 44656905 (-)
AMCG00017105 srgap3 other upstream 979748 45118290 ~ 45161137 (-)
AMCG00017158 NA other upstream 4350585 48489127 ~ 48494407 (-)
AMCG00017178 NA other upstream 5348655 49487197 ~ 49494144 (-)
AMCG00017232 NA other upstream 7045689 51184231 ~ 51212373 (-)

Expression


Co-expression Network