G18127


Basic Information

Item Value
gene id G18127
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 44387443 ~ 44387949 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU22471
ATTTTAGGTGCTTCTTTATTGTAGACTGAATAAACTGTTGGACGTTTATATAGTCCTGCTAagtttataacattttttttttctttaaaatcaatacagacaCAGGATCTGAATATGTAAACCCATTCAGATGCTCTTTAAGAATGAGATTTCAAACACCTATTCACTTAgacattttttaactttaatattatgtaacaatgtttttccttttaaatttgaaatatttgatagGCACTATTTGACTGCTTGCAGGCAAACATGTCAAGAAGTAAATCACAGATAAATCAGTCTTGAGTTTTGTCACATTTGTCTGACCATTGTTTAGGTGTCTAAAATACAGTATCAAGGCTGGATCTGGATGTGTCTGCTGTTTGtgaatgcttgtttttttttttttctttgtgcagAAAGTACAGtcagtgaaataataaatattctttccttatgtgtgtatttgatttttattgttGAACCACGTAAATTAAAACCAATATATTGCTTCTT

Function

GO:

id name namespace
GO:0030687 preribosome, large subunit precursor cellular_component

KEGG:

id description
ko03013 Nucleocytoplasmic transport
ko03030 DNA replication
ko04110 Cell cycle
ko04111 Cell cycle - yeast

RNA

RNA id representative length rna type GC content exon number start site end site
TU22471 True 507 lncRNA 0.30 1 44387443 44387949

Neighbor

gene id symbol gene type direction distance location
AMCG00017081 NA coding upstream 1457 44372888 ~ 44385986 (+)
AMCG00017080 camkv,LOC106582757 coding upstream 15935 44364606 ~ 44371508 (+)
AMCG00017079 NA coding upstream 226972 44146712 ~ 44160471 (+)
AMCG00017070 edem1,LOC102794187 coding upstream 532119 43843414 ~ 43855324 (+)
AMCG00017069 arl8ba,arl8b,LOC107095653,LOC103137213,LOC107552649 coding upstream 545853 43825329 ~ 43841590 (+)
AMCG00017082 NA coding downstream 963 44388912 ~ 44411339 (+)
AMCG00017083 NA coding downstream 57672 44445621 ~ 44453494 (+)
AMCG00017084 NA coding downstream 80170 44468119 ~ 44477790 (+)
AMCG00017088 LOC100694221,LOC104965620,LOC102796420,LOC101486183,LOC103385919 coding downstream 268838 44656787 ~ 44658914 (+)
AMCG00017090 LOC103399082 coding downstream 305034 44692983 ~ 44714100 (+)
G18125 NA non-coding upstream 10215 44376993 ~ 44377228 (+)
G18084 NA non-coding upstream 186405 44116966 ~ 44201038 (+)
G18077 NA non-coding upstream 284044 44102026 ~ 44103399 (+)
G17987 LOC107575789 non-coding upstream 886967 43500170 ~ 43500476 (+)
G17988 NA non-coding upstream 916597 43470070 ~ 43470846 (+)
G18186 NA non-coding downstream 235418 44623367 ~ 44714164 (+)
G18196 usp4 non-coding downstream 281474 44669423 ~ 44670878 (+)
G18197 NA non-coding downstream 283343 44671292 ~ 44671870 (+)
G18255 NA non-coding downstream 597847 44985796 ~ 44986081 (+)
G18302 NA non-coding downstream 855535 45243484 ~ 45243983 (+)
AMCG00017078 LOC106565757 other upstream 249512 44126214 ~ 44137931 (+)
G17697 NA other upstream 1989656 42391297 ~ 42397787 (+)
AMCG00016979 NA other upstream 5132953 39239073 ~ 39254490 (+)
G17193 NA other upstream 5883811 38496051 ~ 38503632 (+)
AMCG00016934 acly,aclya,LOC103369716,LOC108273769 other upstream 9183211 35158597 ~ 35204232 (+)
G18192 NA other downstream 266703 44654652 ~ 44656098 (+)
AMCG00017099 cav3,LOC107673475,LOC107749619,LOC107584510,LOC107577493 other downstream 561085 44949034 ~ 44961601 (+)
AMCG00017167 NA other downstream 4984073 49372022 ~ 49382218 (+)
AMCG00017173 NA other downstream 5014582 49402531 ~ 49403845 (+)
AMCG00017183 NA other downstream 5325518 49713467 ~ 49727567 (+)

Expression


Co-expression Network