Gene
RNA
| Item | Value |
|---|---|
| gene id | G18192 |
| gene name | NA |
| gene type | unknown |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030122.1 |
| NCBI id | CM030122.1 |
| chromosome length | 54868152 |
| location | 44654652 ~ 44656098 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| description |
|---|
| UV excision repair protein RAD23 homolog B-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU22550 | True | 523 | TUCP | 0.48 | 2 | 44654652 | 44656098 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00017084 | NA | coding | upstream | 176862 | 44468119 ~ 44477790 (+) |
| AMCG00017083 | NA | coding | upstream | 201158 | 44445621 ~ 44453494 (+) |
| AMCG00017082 | NA | coding | upstream | 243313 | 44388912 ~ 44411339 (+) |
| AMCG00017081 | NA | coding | upstream | 268666 | 44372888 ~ 44385986 (+) |
| AMCG00017080 | camkv,LOC106582757 | coding | upstream | 283144 | 44364606 ~ 44371508 (+) |
| AMCG00017088 | LOC100694221,LOC104965620,LOC102796420,LOC101486183,LOC103385919 | coding | downstream | 689 | 44656787 ~ 44658914 (+) |
| AMCG00017090 | LOC103399082 | coding | downstream | 36885 | 44692983 ~ 44714100 (+) |
| AMCG00017096 | NA | coding | downstream | 59293 | 44715391 ~ 44739801 (+) |
| AMCG00017102 | grm2,LOC106565576 | coding | downstream | 211816 | 44867914 ~ 44876540 (+) |
| AMCG00017097 | grm2,LOC105017167,LOC106565576,LOC106583186 | coding | downstream | 225767 | 44881865 ~ 44891870 (+) |
| G18127 | NA | non-coding | upstream | 266703 | 44387443 ~ 44387949 (+) |
| G18125 | NA | non-coding | upstream | 277424 | 44376993 ~ 44377228 (+) |
| G18084 | NA | non-coding | upstream | 453614 | 44116966 ~ 44201038 (+) |
| G18077 | NA | non-coding | upstream | 551253 | 44102026 ~ 44103399 (+) |
| G17987 | LOC107575789 | non-coding | upstream | 1154176 | 43500170 ~ 43500476 (+) |
| G18196 | usp4 | non-coding | downstream | 13325 | 44669423 ~ 44670878 (+) |
| G18197 | NA | non-coding | downstream | 15194 | 44671292 ~ 44671870 (+) |
| G18255 | NA | non-coding | downstream | 329698 | 44985796 ~ 44986081 (+) |
| G18302 | NA | non-coding | downstream | 587386 | 45243484 ~ 45243983 (+) |
| G18316 | NA | non-coding | downstream | 870646 | 45526744 ~ 45527005 (+) |
| AMCG00017078 | LOC106565757 | other | upstream | 516721 | 44126214 ~ 44137931 (+) |
| G17697 | NA | other | upstream | 2256865 | 42391297 ~ 42397787 (+) |
| AMCG00016979 | NA | other | upstream | 5400162 | 39239073 ~ 39254490 (+) |
| G17193 | NA | other | upstream | 6151020 | 38496051 ~ 38503632 (+) |
| AMCG00016934 | acly,aclya,LOC103369716,LOC108273769 | other | upstream | 9450420 | 35158597 ~ 35204232 (+) |
| AMCG00017099 | cav3,LOC107673475,LOC107749619,LOC107584510,LOC107577493 | other | downstream | 292936 | 44949034 ~ 44961601 (+) |
| AMCG00017167 | NA | other | downstream | 4715924 | 49372022 ~ 49382218 (+) |
| AMCG00017173 | NA | other | downstream | 4746433 | 49402531 ~ 49403845 (+) |
| AMCG00017183 | NA | other | downstream | 5057369 | 49713467 ~ 49727567 (+) |
| G19113 | NA | other | downstream | 5895782 | 50551880 ~ 50552985 (+) |
