G18197


Basic Information

Item Value
gene id G18197
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 44671292 ~ 44671870 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU22557
CCTCTGCTTCTTGGTCATCATAGTAGAGTTTCTTCTTCTCAGAATCCCAGTCAATTGCCACTGTGGAATGTGCTTTAAGTTTGAGGATGTTGCCGTCACTGGGCAGGGGGCTTATGTCAGCGGTTCCGTATGAATTCACCATGCTGAAGGAAAACAGCTTGACCCGACAGGTCCCTGGCTTGACGGAGGATTTTGGCGTGTTGCCCACTAGCCCGTTCTCCAGGTCCTCGCTGTCCTCCTCCCCCGCTGAGCCCTCCGACTGACTGTGGTCTGGCTCCAGGCTGATCTCCTCCTGATGATCCATGGCTTCGTCCTCC

Function

NR:

description
PREDICTED: sodium-dependent neutral amino acid transporter B(0)AT2-like isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU22557 True 317 lncRNA 0.55 2 44671292 44671870

Neighbor

gene id symbol gene type direction distance location
AMCG00017088 LOC100694221,LOC104965620,LOC102796420,LOC101486183,LOC103385919 coding upstream 12378 44656787 ~ 44658914 (+)
AMCG00017084 NA coding upstream 193502 44468119 ~ 44477790 (+)
AMCG00017083 NA coding upstream 217798 44445621 ~ 44453494 (+)
AMCG00017082 NA coding upstream 259953 44388912 ~ 44411339 (+)
AMCG00017081 NA coding upstream 285306 44372888 ~ 44385986 (+)
AMCG00017090 LOC103399082 coding downstream 21113 44692983 ~ 44714100 (+)
AMCG00017096 NA coding downstream 43521 44715391 ~ 44739801 (+)
AMCG00017102 grm2,LOC106565576 coding downstream 196044 44867914 ~ 44876540 (+)
AMCG00017097 grm2,LOC105017167,LOC106565576,LOC106583186 coding downstream 209995 44881865 ~ 44891870 (+)
AMCG00017098 NA coding downstream 230596 44902466 ~ 44923634 (+)
G18196 usp4 non-coding upstream 414 44669423 ~ 44670878 (+)
G18127 NA non-coding upstream 283343 44387443 ~ 44387949 (+)
G18125 NA non-coding upstream 294064 44376993 ~ 44377228 (+)
G18084 NA non-coding upstream 470254 44116966 ~ 44201038 (+)
G18077 NA non-coding upstream 567893 44102026 ~ 44103399 (+)
G18255 NA non-coding downstream 313926 44985796 ~ 44986081 (+)
G18302 NA non-coding downstream 571614 45243484 ~ 45243983 (+)
G18316 NA non-coding downstream 854874 45526744 ~ 45527005 (+)
G18330 NA non-coding downstream 1110327 45782197 ~ 45782467 (+)
G18357 NA non-coding downstream 1347471 46019341 ~ 46021345 (+)
G18192 NA other upstream 15194 44654652 ~ 44656098 (+)
AMCG00017078 LOC106565757 other upstream 533361 44126214 ~ 44137931 (+)
G17697 NA other upstream 2273505 42391297 ~ 42397787 (+)
AMCG00016979 NA other upstream 5416802 39239073 ~ 39254490 (+)
G17193 NA other upstream 6167660 38496051 ~ 38503632 (+)
AMCG00017099 cav3,LOC107673475,LOC107749619,LOC107584510,LOC107577493 other downstream 277164 44949034 ~ 44961601 (+)
AMCG00017167 NA other downstream 4700152 49372022 ~ 49382218 (+)
AMCG00017173 NA other downstream 4730661 49402531 ~ 49403845 (+)
AMCG00017183 NA other downstream 5041597 49713467 ~ 49727567 (+)
G19113 NA other downstream 5880010 50551880 ~ 50552985 (+)

Expression


Co-expression Network