G18330


Basic Information

Item Value
gene id G18330
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 45782197 ~ 45782467 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU22733
ggaccacttttgataggtactgaccactgcagaccgggaacacccaacaagagctgcagttttggagatgctctgacccagtcgtctagccatcacaatttggcccttgtcaaagtcgctcagatccttacgcttgcccatttttcctgcttctaacacatcaactttgaggacaaaatgctcacttgctgcctaatatatcccacccactgacaggtgccatgataatgagattatcagtgttattcacttcacctgtcagtggtcataa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU22733 True 271 lncRNA 0.46 1 45782197 45782467

Neighbor

gene id symbol gene type direction distance location
AMCG00017104 NA coding upstream 554521 45220114 ~ 45227676 (+)
AMCG00017103 NA coding upstream 847948 44933056 ~ 44934249 (+)
AMCG00017098 NA coding upstream 858563 44902466 ~ 44923634 (+)
AMCG00017097 grm2,LOC105017167,LOC106565576,LOC106583186 coding upstream 890327 44881865 ~ 44891870 (+)
AMCG00017102 grm2,LOC106565576 coding upstream 905657 44867914 ~ 44876540 (+)
AMCG00017113 NA coding downstream 160583 45943050 ~ 46096926 (+)
AMCG00017112 pdzrn3,LOC107584480,LOC107667029,LOC107680714,LOC106582849 coding downstream 446582 46229049 ~ 46245266 (+)
AMCG00017114 pdzrn3 coding downstream 530427 46312894 ~ 46327713 (+)
AMCG00017121 NA coding downstream 630935 46413402 ~ 46415356 (+)
AMCG00017120 NA coding downstream 633930 46416397 ~ 46419842 (+)
G18316 NA non-coding upstream 255192 45526744 ~ 45527005 (+)
G18302 NA non-coding upstream 538214 45243484 ~ 45243983 (+)
G18255 NA non-coding upstream 796116 44985796 ~ 44986081 (+)
G18186 NA non-coding upstream 1068033 44623367 ~ 44714164 (+)
G18357 NA non-coding downstream 236874 46019341 ~ 46021345 (+)
G18363 NA non-coding downstream 318599 46101066 ~ 46101623 (+)
G18365 NA non-coding downstream 323130 46105597 ~ 46106518 (+)
G18386 NA non-coding downstream 589500 46371967 ~ 46372406 (+)
G18420 NA non-coding downstream 781503 46563970 ~ 46564202 (+)
AMCG00017099 cav3,LOC107673475,LOC107749619,LOC107584510,LOC107577493 other upstream 820596 44949034 ~ 44961601 (+)
G18192 NA other upstream 1126099 44654652 ~ 44656098 (+)
AMCG00017078 LOC106565757 other upstream 1644266 44126214 ~ 44137931 (+)
G17697 NA other upstream 3384410 42391297 ~ 42397787 (+)
AMCG00016979 NA other upstream 6527707 39239073 ~ 39254490 (+)
AMCG00017167 NA other downstream 3589555 49372022 ~ 49382218 (+)
AMCG00017173 NA other downstream 3620064 49402531 ~ 49403845 (+)
AMCG00017183 NA other downstream 3931000 49713467 ~ 49727567 (+)
G19113 NA other downstream 4769413 50551880 ~ 50552985 (+)
G19114 raf1,LOC108276324 other downstream 4776983 50559450 ~ 50563278 (+)

Expression


Co-expression Network