G18357


Basic Information

Item Value
gene id G18357
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 46019341 ~ 46021345 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU22781
GGAAGCGGAACTCGCACCTCTCTAACAGTTGTGTTATAAAAAGTGTGAGGAGAGCATCAGCATTACAGCAAAAATAACATCGCACTCACAGAATCAAGTGCTGAGCCACAGAGCTGTACTAGCGTAGTCGTAGGTGTCACTGGAAACCAAGCTGCTCAAGGATGATAACGTATACACAAAGTACTCTCACAGTTACACCAATGGGTAGGGAGCAAGAGCCACAATCCAACAGAAATACAGCTGGTGTTTGATTTATGAGAAAAGCAATTTCCAAGTCTGGAAGAGAAGCACAGTGCTGCTTGTTTTTGTCAGCAGCATgatgcattattttgtgttgctaATTTCCTT

Function

NR:

description
PREDICTED: NACHT, LRR and PYD domains-containing protein 3-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU22781 True 348 lncRNA 0.43 2 46019341 46021345

Neighbor

gene id symbol gene type direction distance location
AMCG00017104 NA coding upstream 791665 45220114 ~ 45227676 (+)
AMCG00017103 NA coding upstream 1085092 44933056 ~ 44934249 (+)
AMCG00017098 NA coding upstream 1095707 44902466 ~ 44923634 (+)
AMCG00017097 grm2,LOC105017167,LOC106565576,LOC106583186 coding upstream 1127471 44881865 ~ 44891870 (+)
AMCG00017102 grm2,LOC106565576 coding upstream 1142801 44867914 ~ 44876540 (+)
AMCG00017112 pdzrn3,LOC107584480,LOC107667029,LOC107680714,LOC106582849 coding downstream 207704 46229049 ~ 46245266 (+)
AMCG00017114 pdzrn3 coding downstream 291549 46312894 ~ 46327713 (+)
AMCG00017121 NA coding downstream 392057 46413402 ~ 46415356 (+)
AMCG00017120 NA coding downstream 395052 46416397 ~ 46419842 (+)
AMCG00017117 rybp,rybpb,LOC107599415,LOC107732045,LOC107680715 coding downstream 484982 46506327 ~ 46508536 (+)
G18330 NA non-coding upstream 236874 45782197 ~ 45782467 (+)
G18316 NA non-coding upstream 492336 45526744 ~ 45527005 (+)
G18302 NA non-coding upstream 775358 45243484 ~ 45243983 (+)
G18255 NA non-coding upstream 1033260 44985796 ~ 44986081 (+)
G18197 NA non-coding upstream 1347471 44671292 ~ 44671870 (+)
G18363 NA non-coding downstream 79721 46101066 ~ 46101623 (+)
G18365 NA non-coding downstream 84252 46105597 ~ 46106518 (+)
G18386 NA non-coding downstream 350622 46371967 ~ 46372406 (+)
G18420 NA non-coding downstream 542625 46563970 ~ 46564202 (+)
G18430 gpr27,LOC106582853,LOC107713489,LOC107599437,LOC106565734 non-coding downstream 584185 46605530 ~ 46608382 (+)
AMCG00017099 cav3,LOC107673475,LOC107749619,LOC107584510,LOC107577493 other upstream 1057740 44949034 ~ 44961601 (+)
G18192 NA other upstream 1363243 44654652 ~ 44656098 (+)
AMCG00017078 LOC106565757 other upstream 1881410 44126214 ~ 44137931 (+)
G17697 NA other upstream 3621554 42391297 ~ 42397787 (+)
AMCG00016979 NA other upstream 6764851 39239073 ~ 39254490 (+)
AMCG00017167 NA other downstream 3350677 49372022 ~ 49382218 (+)
AMCG00017173 NA other downstream 3381186 49402531 ~ 49403845 (+)
AMCG00017183 NA other downstream 3692122 49713467 ~ 49727567 (+)
G19113 NA other downstream 4530535 50551880 ~ 50552985 (+)
G19114 raf1,LOC108276324 other downstream 4538105 50559450 ~ 50563278 (+)

Expression


Co-expression Network