G18365


Basic Information

Item Value
gene id G18365
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 46105597 ~ 46106518 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU22791
ACACATCTTGAATCGTCTGTTTACTACacatatgcatgtgtatgtgtacaagTAGGtaactatgtatgtatttgtatagtcttagaagtattcacacccttcgtTTAAAAATGTTAGTTGATTCGTTGAGTTTAATCAAAACTGCTATCACACTATACTTATTGATGAATTGTGTAGTTGAACTGGTATTCTGTTGATGTCTATGGAGTGGCAGGCCAAGGATTACACCCCATTTCTTAGTTCAGTCAACTGAGGTCTTTACAAATGTAAACCTTTGACTACAAACTTTTGAATACATTCACacatatagagagagattaatgtatagacatacagagagagagcaaaaggGTCTCCTAAAACCAGTTAACTCCTAATTGGAGTATGATTACACTTAAAGTGCAAGAGAGGTTTTCTGTATTGTcagaataatcaaataataatcacaagAAGTAGAAGAATATGATACAATATTAAACGTATGGGCAAAATCATCCAGACCATTTAAGGAAATACATGTTGCTTTAATACTTAGCCAGAAAGCCTTGGGGCTGCTTGCAACCCatgatgaaaatatgaaatgatcccaagtaaaaataaatctattttaaaattaatctgaaatataTGATATCTAGACATATTTCTTCGGTGTTGAGCAAAAATCATTCATGTgtgtaacacagacacacatgagaAATCAATCCTGTCTGTTACTTTGAGATATTACCCCCCAAAGAAGTGAAgagattgtattttgtatgtgtaatcaatttgaatttgttagttttttcaacACTTGgcctttaatttttaatactgctgtattaattcagtgttttctCTATCTCTGTGAGATAGTTCTTTCAAATGTTGATTTCATATTGAAAAGTAATGGATTTGTCTTGTATACTAAAGTTGT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU22791 True 922 lncRNA 0.32 1 46105597 46106518

Neighbor

gene id symbol gene type direction distance location
AMCG00017113 NA coding upstream 8671 45943050 ~ 46096926 (+)
AMCG00017104 NA coding upstream 877921 45220114 ~ 45227676 (+)
AMCG00017103 NA coding upstream 1171348 44933056 ~ 44934249 (+)
AMCG00017098 NA coding upstream 1181963 44902466 ~ 44923634 (+)
AMCG00017097 grm2,LOC105017167,LOC106565576,LOC106583186 coding upstream 1213727 44881865 ~ 44891870 (+)
AMCG00017112 pdzrn3,LOC107584480,LOC107667029,LOC107680714,LOC106582849 coding downstream 122531 46229049 ~ 46245266 (+)
AMCG00017114 pdzrn3 coding downstream 206376 46312894 ~ 46327713 (+)
AMCG00017121 NA coding downstream 306884 46413402 ~ 46415356 (+)
AMCG00017120 NA coding downstream 309879 46416397 ~ 46419842 (+)
AMCG00017117 rybp,rybpb,LOC107599415,LOC107732045,LOC107680715 coding downstream 399809 46506327 ~ 46508536 (+)
G18363 NA non-coding upstream 3974 46101066 ~ 46101623 (+)
G18357 NA non-coding upstream 84252 46019341 ~ 46021345 (+)
G18330 NA non-coding upstream 323130 45782197 ~ 45782467 (+)
G18316 NA non-coding upstream 578592 45526744 ~ 45527005 (+)
G18302 NA non-coding upstream 861614 45243484 ~ 45243983 (+)
G18386 NA non-coding downstream 265449 46371967 ~ 46372406 (+)
G18420 NA non-coding downstream 457452 46563970 ~ 46564202 (+)
G18430 gpr27,LOC106582853,LOC107713489,LOC107599437,LOC106565734 non-coding downstream 499012 46605530 ~ 46608382 (+)
G18462 NA non-coding downstream 811828 46918346 ~ 46920546 (+)
G18464 NA non-coding downstream 824063 46930581 ~ 46930895 (+)
AMCG00017099 cav3,LOC107673475,LOC107749619,LOC107584510,LOC107577493 other upstream 1143996 44949034 ~ 44961601 (+)
G18192 NA other upstream 1449499 44654652 ~ 44656098 (+)
AMCG00017078 LOC106565757 other upstream 1967666 44126214 ~ 44137931 (+)
G17697 NA other upstream 3707810 42391297 ~ 42397787 (+)
AMCG00016979 NA other upstream 6851107 39239073 ~ 39254490 (+)
AMCG00017167 NA other downstream 3265504 49372022 ~ 49382218 (+)
AMCG00017173 NA other downstream 3296013 49402531 ~ 49403845 (+)
AMCG00017183 NA other downstream 3606949 49713467 ~ 49727567 (+)
G19113 NA other downstream 4445362 50551880 ~ 50552985 (+)
G19114 raf1,LOC108276324 other downstream 4452932 50559450 ~ 50563278 (+)

Expression


Co-expression Network