G18419


Basic Information

Item Value
gene id G18419
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 46563094 ~ 46563573 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU22851
tcagcagtggaaaggggtcagcatgggcaccctgactggtctgcggctacgcagccccatacgcaacaaactgcgatgcactgtgtgttctgacacctttctatcagaaccagcattaactttttcagcaatttgagctacagtagcttgtctgttcaATCGGACCACACCGGCCAGTCtttgctccccacatgcatcaatgagccttggccgcccatgaccctgtcgccggttcaccgcttttccttccttggaccacttttgataggtactgagcactgcagaccgggaacaccccacaagagctgcagttttggagatgctctgacccagtcgtctagccatcacaatttgacccttgtcaaagtcgctcagatgcttacgcttgcccatttttcctgcttctaacacatcaactttgaggacaaaatgttcacttgctgcctaatatatcccacccactgacaggtgccatgataa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU22851 True 480 lncRNA 0.51 1 46563094 46563573

Neighbor

gene id symbol gene type direction distance location
AMCG00017115 NA coding downstream 159793 46386418 ~ 46403301 (-)
AMCG00017116 p4r2a,LOC107551500,LOC108276138,LOC102785172 coding downstream 180226 46372466 ~ 46382868 (-)
AMCG00017111 NA coding downstream 663248 45867027 ~ 45899846 (-)
AMCG00017110 NA coding downstream 897433 45662634 ~ 45665661 (-)
AMCG00017109 NA coding downstream 915876 45623126 ~ 45647218 (-)
AMCG00017126 LOC106907125,LOC106941653,LOC107666963 coding upstream 342920 46906493 ~ 46916078 (-)
AMCG00017125 NA coding upstream 354787 46918360 ~ 46930810 (-)
AMCG00017132 NA coding upstream 483700 47047273 ~ 47051406 (-)
AMCG00017137 NA coding upstream 959209 47522782 ~ 47541031 (-)
AMCG00017136 kbtbd8,LOC107600285,LOC107753780,LOC107557775,LOC107729395,LOC107699793 coding upstream 978520 47542093 ~ 47550598 (-)
G18405 NA non-coding downstream 108698 46440069 ~ 46454396 (-)
G18366 NA non-coding downstream 456501 46102262 ~ 46106593 (-)
G18364 NA non-coding downstream 460906 46101960 ~ 46102188 (-)
G18352 NA non-coding downstream 646474 45853062 ~ 45916620 (-)
G18219 NA non-coding downstream 1734068 44799454 ~ 44829026 (-)
G18421 NA non-coding upstream 358 46563931 ~ 46564202 (-)
G18519 fam19a1,LOC101163164,LOC100708151,LOC106903422,LOC107729407,LOC101482978 non-coding upstream 611073 47174646 ~ 47308372 (-)
G18529 NA non-coding upstream 824325 47387898 ~ 47388821 (-)
G18533 suclg2,LOC106583035 non-coding upstream 862674 47426247 ~ 47428085 (-)
G18559 NA non-coding upstream 1063690 47627263 ~ 47627521 (-)
AMCG00017105 srgap3 other downstream 1401957 45118290 ~ 45161137 (-)
AMCG00017091 brk1,BRK1,LOC106565571 other downstream 1906189 44653455 ~ 44656905 (-)
AMCG00017067 sumf1 other downstream 2903492 43633770 ~ 43659602 (-)
AMCG00017060 NA other downstream 3254468 43305697 ~ 43308626 (-)
AMCG00017061 NA other downstream 3276491 43280237 ~ 43286603 (-)
AMCG00017158 NA other upstream 1925554 48489127 ~ 48494407 (-)
AMCG00017178 NA other upstream 2923624 49487197 ~ 49494144 (-)
AMCG00017232 NA other upstream 4620658 51184231 ~ 51212373 (-)
AMCG00017234 LOC100690894,LOC102799047,LOC102206238 other upstream 4867114 51430687 ~ 51435239 (-)
G19335 NA other upstream 4882014 51445587 ~ 51449786 (-)

Expression


Co-expression Network