G18430 (gpr27,LOC106582853,LOC107713489,LOC107599437,LOC106565734)


Basic Information

Item Value
gene id G18430
gene name gpr27,LOC106582853,LOC107713489,LOC107599437,LOC106565734
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 46605530 ~ 46608382 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU22862
GTCCTTCATTAtgtaatggtttattttcaagtaaaaacattgcaaatacaCAACTTTCTACAGCTTTGAGGCATTTATAGTAATAAATTCTGACATTTTCTCTTCacccaaaaaatatatttttacatttaattttaaagggaATGTGAAAGGAAGCATTTTTgtcaacacatttccaaaaaTTCCATGTATATTAtcgaaaagaaaagaaaaggtaaaactgaggattgaaaacaaagtttgtcattattttttcctGCACAAAACTAAGAAAATCTTATCAAAGATAATACTTcaataaaaagttaataataaaagcaataattatATTAGCTGTACAGAATTTACATCTAGAGAACAAATAACCCTTCCAGTTGTGGTAAAGTATACATTGTTCAGAATGAAAGGATCCTCTGCCTGTAAGACTCACTCGTTAGCATTGAAtagtggaaaaatatatatatttatctttttaaaaatatggtgTCTTCATACTTCCTGTGTAACTTCCATTCAATTATTGCAAAATATGGCCTTAAAGTAATATTCCAGGAAATCCAAGGTCAGCCTGCATAGCTGAAGAAAAGGAACCAACCaggaacacactcacacatgcacacacatgaacacacacatacaaaactaaacaaaatcctCGAAGCCCTTTCAGTCAAGGAACTTTGAAACATGAGAAAAATTCCTCCTTATGCTAATGTTTTGCATCTCTATCAGTTCAAAATGACATCAAAAaggtcatcatcatcatcatcatcatcatcatcataataataatactaaattatataaCACAATATGGCTCCATTGGTGTCTGTGTGCTCAGGCAGCAGGGAAAATGGGTTCTGAAACAAATCCTCAGCtctttgttaaatataaagCAGAGAATAGGATTCACTCCTGCTTGTGCAAATGTCATCCACACAGCAGCAGTCAGATAGACCTGTGGTATGGTACTTGCTTTCACAAACACGCGAAGGTAGCAGGCAACAATATAGGGTGACcaaaggagaaggaaaaggaggGTGATCATGTAAAACATCTTGCCGATTcgtttttccattttgaattccTCCAGGACCAGCAGCCTCTTATTGGAGTTGTGAGTAGCTTGTCTGATGCCCACTAATGTTGGTGGGGTGGGACCTCTTCCAAAACCTGCTATCCAGTTGGCAGCTGCTTGACCAGTGGCGCCTGGTCCATGGAACGTCCAGTTTTGACTTATTGCAGGAATCAGCTGAGCAGGTTTCATCTTGCGATGGTcgtaaacaaaaaacagcattttgatATAGACCACATGTGTGGTGCCCACTATGACTGCCAGCATCAACATGAAACCCAGGGTGTCATTTGCTTTCACATACCGATGCTCAAAAATGCACTGCTCTTCCTCCCTGATAAATTTGTAAGTGCCCACATCAAATACAGGCGGAAATGCCATGGCGACAGAAAGAGTCCAAACCATGCAGATGACAGCCACACAAGTCCATAGAGTCATTCTTTTGGAATAAAACCTGTGATGTGCAATTGCCATGTATCGGGTTACACTGATGCAGAATAGCATAAATGCGGCGTGGAAACAGAAGAGCACTGCCACAAAGGCTATGATCTTGCAGCTAATGATGCTGTAAGTCCAGCTGGAACCACTGCTGATAGATATCATCACAAAgggaaaacacacaacagatcTTATGATATCGGCCAGGCACAGATCCAAGAGAAAGTAATAAGGAGCCCGGTGCAAGGTCCTGTCTTTCAGTACGAGGAAACAAAGCAGCACATTTCCAGCTAGGCTAATACAGATGATCAAGCCGAGAGATGCCAGCTTCACTGCAGAAGCAGTAATGGCATAATTGTGAAGCGAGGTGTTGCTTTCTCCATGCTCACTTGCGTTCGCCATCTATGCAACCCAACAACTGACAACCTCTATCATCCCATTTAAAACAGAACTGGGTTTTAGTCCTTCAATGGAGtcataaacacataaacatcAGTGAGGAGGCTTACACTACCTTAAGCACTTACAAATGTATGCTtctcaaaatatacaaatccaTTGCATTACAAAATCCGAGTCCAGCGCATTGTTTCATTTGCTCCCGACCAGCgatttctcctcttctcttcccatcacaTCGTGCGATTCAGTCAACATTGCCCATgtctttttattcttcttcattATGAAAGCACCCgcttgcaataaaaaaaacatatgaaacgtatatatgtgtgcatCCTTCTGCACGGGTCTTCTGCAGTCGAAGAAGCCGTGTAGCATCTTGTTGCTGTCCGTCCTCGTTTACTGTCTTATATAAAAGGatcatgtaaaaaaatgaaagcaaatataAAGCATGTTCATTCTCAGCAGTGGTCGTTTTTATGCATTAGTCCGCCTTGGACACGTTACAGGGATGGAGGGAAGTTATATTTAAGCAGCGCGTTGTGCATATTGAGTCGATTACAAATGGCTCGTTAGTTAACAAGGTCCGAACATATCCCATCGAgtagaaatatataatactaccttttatttttgcagctGTCAAAAAGCTGAACTTCCGGGGACGGGTCGTCGCCATAGGATGATTTTAAGGTAGATTGAGGCTGCGCCAAAAATAGAGAGAAAAATTGAAACAGGGATGAAATATATGTGTACAGGATCTAATCCACAGTCTCTTTAGTTATCTGTAATGATCCGTTTTTTCCTCTCGTGTGTAACGCATGATCTCAAGAAATCACTGGCGCTTGTCTGCCTCCAAAGCGTGTATTTGTTCCCATTTTTTAAAGCTTAGCTAATGCAATCGTTTCAGTCTGGATGCACAGCCACCACCTCGG

Function

symbol description
gpr27 Predicted to enable G protein-coupled receptor activity. Involved in glucose homeostasis. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be active in plasma membrane. Is expressed in ovary. Orthologous to human GPR27 (G protein-coupled receptor 27).

NR:

description
PREDICTED: probable G-protein coupled receptor 27

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU22862 True 2853 lncRNA 0.40 1 46605530 46608382

Neighbor

gene id symbol gene type direction distance location
AMCG00017119 NA coding upstream 4813 46599760 ~ 46600717 (+)
AMCG00017117 rybp,rybpb,LOC107599415,LOC107732045,LOC107680715 coding upstream 96994 46506327 ~ 46508536 (+)
AMCG00017120 NA coding upstream 185688 46416397 ~ 46419842 (+)
AMCG00017121 NA coding upstream 190174 46413402 ~ 46415356 (+)
AMCG00017114 pdzrn3 coding upstream 277817 46312894 ~ 46327713 (+)
AMCG00017118 eif4e3,LOC107727004,LOC107681400,LOC107666244,LOC107568047,LOC107705706 coding downstream 2334 46610716 ~ 46621777 (+)
AMCG00017123 NA coding downstream 164093 46772475 ~ 46808666 (+)
AMCG00017124 NA coding downstream 245546 46853928 ~ 46892467 (+)
AMCG00017131 NA coding downstream 398753 47007135 ~ 47036741 (+)
AMCG00017127 lmod3,LOC102786770 coding downstream 432495 47040877 ~ 47044679 (+)
G18420 NA non-coding upstream 41328 46563970 ~ 46564202 (+)
G18386 NA non-coding upstream 233124 46371967 ~ 46372406 (+)
G18365 NA non-coding upstream 499012 46105597 ~ 46106518 (+)
G18363 NA non-coding upstream 503907 46101066 ~ 46101623 (+)
G18357 NA non-coding upstream 584185 46019341 ~ 46021345 (+)
G18462 NA non-coding downstream 309964 46918346 ~ 46920546 (+)
G18464 NA non-coding downstream 322199 46930581 ~ 46930895 (+)
G18470 NA non-coding downstream 420405 47028787 ~ 47038523 (+)
G18538 NA non-coding downstream 870596 47478978 ~ 47479256 (+)
G18582 NA non-coding downstream 1246010 47854392 ~ 47854658 (+)
AMCG00017099 cav3,LOC107673475,LOC107749619,LOC107584510,LOC107577493 other upstream 1643929 44949034 ~ 44961601 (+)
G18192 NA other upstream 1949432 44654652 ~ 44656098 (+)
AMCG00017078 LOC106565757 other upstream 2467599 44126214 ~ 44137931 (+)
G17697 NA other upstream 4207743 42391297 ~ 42397787 (+)
AMCG00016979 NA other upstream 7351040 39239073 ~ 39254490 (+)
AMCG00017167 NA other downstream 2763640 49372022 ~ 49382218 (+)
AMCG00017173 NA other downstream 2794149 49402531 ~ 49403845 (+)
AMCG00017183 NA other downstream 3105085 49713467 ~ 49727567 (+)
G19113 NA other downstream 3943498 50551880 ~ 50552985 (+)
G19114 raf1,LOC108276324 other downstream 3951068 50559450 ~ 50563278 (+)

Expression


Co-expression Network