Gene
RNA
| Item | Value |
|---|---|
| gene id | G18582 |
| gene name | NA |
| gene type | non-coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030122.1 |
| NCBI id | CM030122.1 |
| chromosome length | 54868152 |
| location | 47854392 ~ 47854658 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU23063 | True | 221 | lncRNA | 0.48 | 2 | 47854392 | 47854658 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00017138 | NA | coding | upstream | 168520 | 47629116 ~ 47685872 (+) |
| AMCG00017135 | suclg2,LOC106565836 | coding | upstream | 380563 | 47465171 ~ 47473829 (+) |
| AMCG00017134 | suclg2 | coding | upstream | 425769 | 47387184 ~ 47428623 (+) |
| AMCG00017133 | NA | coding | upstream | 690150 | 47090369 ~ 47164242 (+) |
| AMCG00017129 | LOC107655985 | coding | upstream | 770874 | 47072719 ~ 47083518 (+) |
| AMCG00017140 | magi1,magi1b,LOC107728617,LOC107553826 | coding | downstream | 49024 | 47903682 ~ 47950784 (+) |
| AMCG00017142 | NA | coding | downstream | 157354 | 48012012 ~ 48062227 (+) |
| AMCG00017143 | NA | coding | downstream | 278960 | 48133618 ~ 48143478 (+) |
| AMCG00017144 | psmd6 | coding | downstream | 315638 | 48170296 ~ 48173353 (+) |
| AMCG00017147 | thoc7 | coding | downstream | 357995 | 48212653 ~ 48216163 (+) |
| G18538 | NA | non-coding | upstream | 375136 | 47478978 ~ 47479256 (+) |
| G18470 | NA | non-coding | upstream | 815869 | 47028787 ~ 47038523 (+) |
| G18464 | NA | non-coding | upstream | 923497 | 46930581 ~ 46930895 (+) |
| G18462 | NA | non-coding | upstream | 933846 | 46918346 ~ 46920546 (+) |
| G18430 | gpr27,LOC106582853,LOC107713489,LOC107599437,LOC106565734 | non-coding | upstream | 1246010 | 46605530 ~ 46608382 (+) |
| G18607 | NA | non-coding | downstream | 207741 | 48062399 ~ 48065018 (+) |
| G18722 | NA | non-coding | downstream | 467605 | 48322263 ~ 48326805 (+) |
| G18791 | NA | non-coding | downstream | 1352150 | 49206808 ~ 49211256 (+) |
| G18865 | NA | non-coding | downstream | 1581606 | 49436264 ~ 49493349 (+) |
| G18908 | alas1,LOC106566237,LOC103399559 | non-coding | downstream | 1727606 | 49582264 ~ 49670289 (+) |
| AMCG00017099 | cav3,LOC107673475,LOC107749619,LOC107584510,LOC107577493 | other | upstream | 2892791 | 44949034 ~ 44961601 (+) |
| G18192 | NA | other | upstream | 3198294 | 44654652 ~ 44656098 (+) |
| AMCG00017078 | LOC106565757 | other | upstream | 3716461 | 44126214 ~ 44137931 (+) |
| G17697 | NA | other | upstream | 5456605 | 42391297 ~ 42397787 (+) |
| AMCG00016979 | NA | other | upstream | 8599902 | 39239073 ~ 39254490 (+) |
| AMCG00017167 | NA | other | downstream | 1517364 | 49372022 ~ 49382218 (+) |
| AMCG00017173 | NA | other | downstream | 1547873 | 49402531 ~ 49403845 (+) |
| AMCG00017183 | NA | other | downstream | 1858809 | 49713467 ~ 49727567 (+) |
| G19113 | NA | other | downstream | 2697222 | 50551880 ~ 50552985 (+) |
| G19114 | raf1,LOC108276324 | other | downstream | 2704792 | 50559450 ~ 50563278 (+) |
