Gene
RNA
| Item | Value |
|---|---|
| gene id | G18827 |
| gene name | NA |
| gene type | non-coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030122.1 |
| NCBI id | CM030122.1 |
| chromosome length | 54868152 |
| location | 49360668 ~ 49360937 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU23365 | True | 270 | lncRNA | 0.49 | 1 | 49360668 | 49360937 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00017168 | LOC105028385,LOC106583015,LOC100136667 | coding | downstream | 41749 | 49301962 ~ 49318919 (-) |
| AMCG00017160 | LOC107752167 | coding | downstream | 773029 | 48584476 ~ 48587639 (-) |
| AMCG00017159 | ptprg,LOC107592848 | coding | downstream | 801233 | 48503918 ~ 48559435 (-) |
| AMCG00017151 | NA | coding | downstream | 1014917 | 48323815 ~ 48345751 (-) |
| AMCG00017148 | NA | coding | downstream | 1099642 | 48249354 ~ 48261026 (-) |
| AMCG00017170 | NA | coding | upstream | 8639 | 49369576 ~ 49370958 (-) |
| AMCG00017169 | NA | coding | upstream | 15586 | 49376523 ~ 49383368 (-) |
| AMCG00017175 | NA | coding | upstream | 43185 | 49404122 ~ 49447336 (-) |
| AMCG00017174 | nisch | coding | upstream | 94557 | 49455494 ~ 49477304 (-) |
| AMCG00017177 | dusp7,LOC107712495,LOC107677944 | coding | upstream | 218652 | 49579589 ~ 49589402 (-) |
| G18709 | NA | non-coding | downstream | 1123255 | 48232690 ~ 48237413 (-) |
| G18702 | NA | non-coding | downstream | 1136350 | 48224050 ~ 48224318 (-) |
| G18690 | NA | non-coding | downstream | 1189558 | 48170158 ~ 48171110 (-) |
| G18652 | NA | non-coding | downstream | 1295629 | 48062312 ~ 48065039 (-) |
| G18651 | NA | non-coding | downstream | 1306046 | 48054208 ~ 48054622 (-) |
| G18828 | nek4,LOC106565859 | non-coding | upstream | 723 | 49361660 ~ 49361926 (-) |
| G18829 | NA | non-coding | upstream | 2812 | 49363749 ~ 49364302 (-) |
| G18830 | NA | non-coding | upstream | 4269 | 49365206 ~ 49366441 (-) |
| G18831 | NA | non-coding | upstream | 6544 | 49367481 ~ 49368062 (-) |
| G18832 | NA | non-coding | upstream | 7681 | 49368618 ~ 49369551 (-) |
| AMCG00017158 | NA | other | downstream | 866261 | 48489127 ~ 48494407 (-) |
| AMCG00017105 | srgap3 | other | downstream | 4199531 | 45118290 ~ 45161137 (-) |
| AMCG00017091 | brk1,BRK1,LOC106565571 | other | downstream | 4703763 | 44653455 ~ 44656905 (-) |
| AMCG00017067 | sumf1 | other | downstream | 5701066 | 43633770 ~ 43659602 (-) |
| AMCG00017060 | NA | other | downstream | 6052042 | 43305697 ~ 43308626 (-) |
| AMCG00017178 | NA | other | upstream | 126260 | 49487197 ~ 49494144 (-) |
| AMCG00017232 | NA | other | upstream | 1823294 | 51184231 ~ 51212373 (-) |
| AMCG00017234 | LOC100690894,LOC102799047,LOC102206238 | other | upstream | 2069750 | 51430687 ~ 51435239 (-) |
| G19335 | NA | other | upstream | 2084650 | 51445587 ~ 51449786 (-) |
| AMCG00017251 | actr8 | other | upstream | 2485659 | 51846596 ~ 51860267 (-) |
