Gene
RNA
| Item | Value |
|---|---|
| gene id | G18828 |
| gene name | nek4,LOC106565859 |
| gene type | non-coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030122.1 |
| NCBI id | CM030122.1 |
| chromosome length | 54868152 |
| location | 49361660 ~ 49361926 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| symbol | description |
|---|---|
| nek4 | Predicted to enable ATP binding activity and protein kinase activity. Predicted to act upstream of or within protein phosphorylation. Orthologous to human NEK4 (NIMA related kinase 4). |
| description |
|---|
| PREDICTED: serine/threonine-protein kinase Nek4-like isoform X1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU23366 | True | 267 | lncRNA | 0.51 | 1 | 49361660 | 49361926 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00017168 | LOC105028385,LOC106583015,LOC100136667 | coding | downstream | 42741 | 49301962 ~ 49318919 (-) |
| AMCG00017160 | LOC107752167 | coding | downstream | 774021 | 48584476 ~ 48587639 (-) |
| AMCG00017159 | ptprg,LOC107592848 | coding | downstream | 802225 | 48503918 ~ 48559435 (-) |
| AMCG00017151 | NA | coding | downstream | 1015909 | 48323815 ~ 48345751 (-) |
| AMCG00017148 | NA | coding | downstream | 1100634 | 48249354 ~ 48261026 (-) |
| AMCG00017170 | NA | coding | upstream | 7650 | 49369576 ~ 49370958 (-) |
| AMCG00017169 | NA | coding | upstream | 14597 | 49376523 ~ 49383368 (-) |
| AMCG00017175 | NA | coding | upstream | 42196 | 49404122 ~ 49447336 (-) |
| AMCG00017174 | nisch | coding | upstream | 93568 | 49455494 ~ 49477304 (-) |
| AMCG00017177 | dusp7,LOC107712495,LOC107677944 | coding | upstream | 217663 | 49579589 ~ 49589402 (-) |
| G18827 | NA | non-coding | downstream | 723 | 49360668 ~ 49360937 (-) |
| G18709 | NA | non-coding | downstream | 1124247 | 48232690 ~ 48237413 (-) |
| G18702 | NA | non-coding | downstream | 1137342 | 48224050 ~ 48224318 (-) |
| G18690 | NA | non-coding | downstream | 1190550 | 48170158 ~ 48171110 (-) |
| G18652 | NA | non-coding | downstream | 1296621 | 48062312 ~ 48065039 (-) |
| G18829 | NA | non-coding | upstream | 1823 | 49363749 ~ 49364302 (-) |
| G18830 | NA | non-coding | upstream | 3280 | 49365206 ~ 49366441 (-) |
| G18831 | NA | non-coding | upstream | 5555 | 49367481 ~ 49368062 (-) |
| G18832 | NA | non-coding | upstream | 6692 | 49368618 ~ 49369551 (-) |
| G18945 | LOC105893506,LOC108431510,LOC106566656,LOC107586924,LOC107593103,LOC107704447 | non-coding | upstream | 345740 | 49707666 ~ 49709260 (-) |
| AMCG00017158 | NA | other | downstream | 867253 | 48489127 ~ 48494407 (-) |
| AMCG00017105 | srgap3 | other | downstream | 4200523 | 45118290 ~ 45161137 (-) |
| AMCG00017091 | brk1,BRK1,LOC106565571 | other | downstream | 4704755 | 44653455 ~ 44656905 (-) |
| AMCG00017067 | sumf1 | other | downstream | 5702058 | 43633770 ~ 43659602 (-) |
| AMCG00017060 | NA | other | downstream | 6053034 | 43305697 ~ 43308626 (-) |
| AMCG00017178 | NA | other | upstream | 125271 | 49487197 ~ 49494144 (-) |
| AMCG00017232 | NA | other | upstream | 1822305 | 51184231 ~ 51212373 (-) |
| AMCG00017234 | LOC100690894,LOC102799047,LOC102206238 | other | upstream | 2068761 | 51430687 ~ 51435239 (-) |
| G19335 | NA | other | upstream | 2083661 | 51445587 ~ 51449786 (-) |
| AMCG00017251 | actr8 | other | upstream | 2484670 | 51846596 ~ 51860267 (-) |
