G18832


Basic Information

Item Value
gene id G18832
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 49368618 ~ 49369551 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU23370
GGGCATAAGCCAGGTACGATATATATGTTTAGGGGAAGgtcagtacaggtgagaggataagaaatataaacatgtatcaGTACAGAACCTTaacttaatacaaaaaatactataaacCCTCATTTAACACTTGAATgcataaatgtgaaatattgtacatttttgtattttaaaactttttagttgtatttcacattttatttagaacatataaaaacattacagcCATAATCTAAAATGCACAACAAGCAGTAGGGGAAAACTACTTCAGCACTCAGCACTGCGTCCCCCCCGTGTGAAAAAGTCCAAAAATAGTTCTCTATGGGGTTTACACTAGGATTATGACACTAATCattaaagtaatataaatgCATGCTAGAAATGATCTGCTGGCCTCTCAGTTGTGATTCTGATGAATTCAGTAACAACTGTATCAGCAATATACGTATTTCATATTGCATAACTAAAACCATGTAGCAAAGTCCTAGTGCACTTAACATtaaatgcacacatatataaaatctaGGAATCTACATCTGTAAGGGTATTTACATTAGAGTGATTACAGATCCTCAGAGTGCACTGCGATGTTGAATACAGTTGTGTATAGTTTACATGTATTTCTAGGTCTTTCACATAGATCCGCACCCTGAAATCCCAAAGGCATATTTTAAGTCATTGCTATAGATTTTGATATACTTGTGGGAAAAGGCTATTCTTTGAATGCGATGTCTTCAAAGAACTTTAGCTGGCGCACCATGACAGCATATTTTTTGTACTCGTCTCCTCCCATCTGTTCTCGAAGGCGTAGCtgagaggagaagaaaaatagtTACTGAATGGCAAAACCACAAAAGCAAATTTTAATAAGTAATCACATCTTAGTGTAACAATGCACAGTGAAGAGTGCATCAGacaaatactttatttactg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU23370 True 934 lncRNA 0.35 1 49368618 49369551

Neighbor

gene id symbol gene type direction distance location
AMCG00017168 LOC105028385,LOC106583015,LOC100136667 coding downstream 49699 49301962 ~ 49318919 (-)
AMCG00017160 LOC107752167 coding downstream 780979 48584476 ~ 48587639 (-)
AMCG00017159 ptprg,LOC107592848 coding downstream 809183 48503918 ~ 48559435 (-)
AMCG00017151 NA coding downstream 1022867 48323815 ~ 48345751 (-)
AMCG00017148 NA coding downstream 1107592 48249354 ~ 48261026 (-)
AMCG00017170 NA coding upstream 25 49369576 ~ 49370958 (-)
AMCG00017169 NA coding upstream 6972 49376523 ~ 49383368 (-)
AMCG00017175 NA coding upstream 34571 49404122 ~ 49447336 (-)
AMCG00017174 nisch coding upstream 85943 49455494 ~ 49477304 (-)
AMCG00017177 dusp7,LOC107712495,LOC107677944 coding upstream 210038 49579589 ~ 49589402 (-)
G18831 NA non-coding downstream 556 49367481 ~ 49368062 (-)
G18830 NA non-coding downstream 2177 49365206 ~ 49366441 (-)
G18829 NA non-coding downstream 4316 49363749 ~ 49364302 (-)
G18828 nek4,LOC106565859 non-coding downstream 6692 49361660 ~ 49361926 (-)
G18827 NA non-coding downstream 7681 49360668 ~ 49360937 (-)
G18945 LOC105893506,LOC108431510,LOC106566656,LOC107586924,LOC107593103,LOC107704447 non-coding upstream 338115 49707666 ~ 49709260 (-)
G18961 NA non-coding upstream 355646 49725197 ~ 49725675 (-)
G18962 NA non-coding upstream 356769 49726320 ~ 49726935 (-)
G18970 NA non-coding upstream 393646 49763197 ~ 49765192 (-)
G19030 atp2b2,LOC107561799,LOC107570616 non-coding upstream 691296 50060847 ~ 50071504 (-)
AMCG00017158 NA other downstream 874211 48489127 ~ 48494407 (-)
AMCG00017105 srgap3 other downstream 4207481 45118290 ~ 45161137 (-)
AMCG00017091 brk1,BRK1,LOC106565571 other downstream 4711713 44653455 ~ 44656905 (-)
AMCG00017067 sumf1 other downstream 5709016 43633770 ~ 43659602 (-)
AMCG00017060 NA other downstream 6059992 43305697 ~ 43308626 (-)
AMCG00017178 NA other upstream 117646 49487197 ~ 49494144 (-)
AMCG00017232 NA other upstream 1814680 51184231 ~ 51212373 (-)
AMCG00017234 LOC100690894,LOC102799047,LOC102206238 other upstream 2061136 51430687 ~ 51435239 (-)
G19335 NA other upstream 2076036 51445587 ~ 51449786 (-)
AMCG00017251 actr8 other upstream 2477045 51846596 ~ 51860267 (-)

Expression


Co-expression Network