G18865


Basic Information

Item Value
gene id G18865
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 49436264 ~ 49493349 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU23406
tttttttttttttttTTCCTTTCAATAACCCATGGTTTTATTCAGGTACAAAACTGGCTTCAGGTGAAAAACAGTCCGAAAGGAAAAATGATGGGAGTTGGTGCTTCTGGGATGTTCCTGCTGCTTATTTGGCACTTGCTTTGGCTGCCATGGCCTTCGCGCCCTTCTTGTTGTGCTTCTTAGCGAAACGCATGTTTCTCAGGAACTTTGGATCAACCCCTTCAGAGACTCGTATCTGTCAGACCTTGGCTTTTTGATGCCATTTCTGTGAGCTTTGCGAGACTGGTTGTGGGTGGTGTGGTTCTTAGACTTCGCCATTTTTAGATTTGACTTCCACCAGAACGGAGTCACAACCGGAAGAGAAAGGAGGACCGCGATGCACTGTGGGATATACCGGCACCAGAACCATCCACCATAGAGTTCGAGAAACGACGCTCTAGACTGTGTCGGTGGTGCTCCCGCAATATACGCGTCTGCGGGAACTATGGTTCCgcaagaaaaagagaaaatgtagtTAACAACGACAAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU23406 True 529 lncRNA 0.46 5 49436264 49493349

Neighbor

gene id symbol gene type direction distance location
AMCG00017172 NA coding upstream 20302 49404227 ~ 49415962 (+)
AMCG00017171 pbrm1,LOC107699352,LOC107744848 coding upstream 38352 49384611 ~ 49397912 (+)
AMCG00017166 NA coding upstream 67425 49360827 ~ 49368839 (+)
AMCG00017162 LOC106565857,LOC105028386,LOC106583017,LOC105912203,LOC107706913 coding upstream 157578 49265461 ~ 49278686 (+)
AMCG00017164 NA coding upstream 183577 49237902 ~ 49252687 (+)
AMCG00017181 NA coding downstream 184815 49678164 ~ 49697848 (+)
AMCG00017182 LOC105893506,LOC108431510 coding downstream 214186 49707535 ~ 49709079 (+)
AMCG00017184 NA coding downstream 255494 49748843 ~ 49765192 (+)
AMCG00017185 NA coding downstream 275611 49768960 ~ 49780898 (+)
AMCG00017188 NA coding downstream 297530 49790879 ~ 49796155 (+)
G18791 NA non-coding upstream 225008 49206808 ~ 49211256 (+)
G18722 NA non-coding upstream 1109459 48322263 ~ 48326805 (+)
G18607 NA non-coding upstream 1371246 48062399 ~ 48065018 (+)
G18582 NA non-coding upstream 1581606 47854392 ~ 47854658 (+)
G18538 NA non-coding upstream 1957008 47478978 ~ 47479256 (+)
G18908 alas1,LOC106566237,LOC103399559 non-coding downstream 88915 49582264 ~ 49670289 (+)
G18909 NA non-coding downstream 179736 49673085 ~ 49673926 (+)
G19040 NA non-coding downstream 661009 50154358 ~ 50154694 (+)
G19042 LOC103376870 non-coding downstream 662104 50155453 ~ 50155825 (+)
G19058 NA non-coding downstream 839117 50332466 ~ 50333366 (+)
AMCG00017173 NA other upstream 32419 49402531 ~ 49403845 (+)
AMCG00017167 NA other upstream 54046 49372022 ~ 49382218 (+)
AMCG00017099 cav3,LOC107673475,LOC107749619,LOC107584510,LOC107577493 other upstream 4474663 44949034 ~ 44961601 (+)
G18192 NA other upstream 4780166 44654652 ~ 44656098 (+)
AMCG00017078 LOC106565757 other upstream 5298333 44126214 ~ 44137931 (+)
AMCG00017183 NA other downstream 220118 49713467 ~ 49727567 (+)
G19113 NA other downstream 1058531 50551880 ~ 50552985 (+)
G19114 raf1,LOC108276324 other downstream 1066101 50559450 ~ 50563278 (+)
AMCG00017280 NA other downstream 3320904 52814253 ~ 52817369 (+)
AMCG00017287 NA other downstream 3327712 52821061 ~ 52834042 (+)

Expression


Co-expression Network