G18909


Basic Information

Item Value
gene id G18909
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 49673085 ~ 49673926 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU23468
CTGTCTTTAGCCCTGTGCCCAGCTGACTGCTGATATCGTCCTCACCTTTCCGGACCACGTGCATCTCCTGTACGTCCTCCTGTAGCTCCATGCTGGCCTGGCAGAACACATTGCTGTTTCCCTGGCCCATCTCAGCCGCGAGAAAGGGGCACCTAGAAGAAGCCGTTTGATTGGGTGGGGGGACTGGGTGACCACTGGGGAGCTTGGGAGTTTGCCTGGGACCTCATTAGTTGGAGTCGTTTCCTTGGTCTCCTGGCAATTAGCAGCAGAAGTAGTGAGGGTACGAGCAAAAGGTCTTGATGCCAGGTTCATCATCACGGGACATTTCTGAGCGTAGAAAACCAGAGACTTTCCTGCTTTCTGGAGAAATGTCTGGGGGACCCGAGACAAGAAGGGGCAGCGACGAATGAGGGTGTCCATTTTGATCTTTGATTGTCTTAATCTGAAAtgaggggggaaaataaaaaaaaa

Function

NR:

description
PREDICTED: NACHT, LRR and PYD domains-containing protein 12-like isoform X4

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU23468 True 471 lncRNA 0.52 2 49673085 49673926

Neighbor

gene id symbol gene type direction distance location
AMCG00017176 tnnc1,LOC106571909,LOC108232086 coding upstream 190665 49481225 ~ 49482420 (+)
AMCG00017172 NA coding upstream 257123 49404227 ~ 49415962 (+)
AMCG00017171 pbrm1,LOC107699352,LOC107744848 coding upstream 275173 49384611 ~ 49397912 (+)
AMCG00017166 NA coding upstream 304246 49360827 ~ 49368839 (+)
AMCG00017162 LOC106565857,LOC105028386,LOC106583017,LOC105912203,LOC107706913 coding upstream 394399 49265461 ~ 49278686 (+)
AMCG00017181 NA coding downstream 4238 49678164 ~ 49697848 (+)
AMCG00017182 LOC105893506,LOC108431510 coding downstream 33609 49707535 ~ 49709079 (+)
AMCG00017184 NA coding downstream 74917 49748843 ~ 49765192 (+)
AMCG00017185 NA coding downstream 95034 49768960 ~ 49780898 (+)
AMCG00017188 NA coding downstream 116953 49790879 ~ 49796155 (+)
G18908 alas1,LOC106566237,LOC103399559 non-coding upstream 2796 49582264 ~ 49670289 (+)
G18865 NA non-coding upstream 179736 49436264 ~ 49493349 (+)
G18791 NA non-coding upstream 461829 49206808 ~ 49211256 (+)
G18722 NA non-coding upstream 1346280 48322263 ~ 48326805 (+)
G18607 NA non-coding upstream 1608067 48062399 ~ 48065018 (+)
G19040 NA non-coding downstream 480432 50154358 ~ 50154694 (+)
G19042 LOC103376870 non-coding downstream 481527 50155453 ~ 50155825 (+)
G19058 NA non-coding downstream 658540 50332466 ~ 50333366 (+)
G19059 NA non-coding downstream 659834 50333760 ~ 50334506 (+)
G19061 NA non-coding downstream 667491 50341417 ~ 50342150 (+)
AMCG00017173 NA other upstream 269240 49402531 ~ 49403845 (+)
AMCG00017167 NA other upstream 290867 49372022 ~ 49382218 (+)
AMCG00017099 cav3,LOC107673475,LOC107749619,LOC107584510,LOC107577493 other upstream 4711484 44949034 ~ 44961601 (+)
G18192 NA other upstream 5016987 44654652 ~ 44656098 (+)
AMCG00017078 LOC106565757 other upstream 5535154 44126214 ~ 44137931 (+)
AMCG00017183 NA other downstream 39541 49713467 ~ 49727567 (+)
G19113 NA other downstream 877954 50551880 ~ 50552985 (+)
G19114 raf1,LOC108276324 other downstream 885524 50559450 ~ 50563278 (+)
AMCG00017280 NA other downstream 3140327 52814253 ~ 52817369 (+)
AMCG00017287 NA other downstream 3147135 52821061 ~ 52834042 (+)

Expression


Co-expression Network