G19040


Basic Information

Item Value
gene id G19040
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 50154358 ~ 50154694 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU23626
agtggtcagtacctatcaaaagtggtccaaggaaggaaaagcggtgaaccggcgacagggtcatgggcagccaaggctcattgatgcacgtggggagcgaaggctggcccgtgtggtctgatccaacaaactagctactgtagctcaaattgctgaaaaagtgaatgctggttctgatagaaaggtgtcagaacacacagtgcatcgcagtttgttgcgtatggggctgcgtagccgcagaccagtcagggtgcccatgctgacccctgtccactgccgaaagcgcctacaatgggcacgtgagcatcagaactggaccacggagcaatggaagaag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU23626 True 337 lncRNA 0.54 1 50154358 50154694

Neighbor

gene id symbol gene type direction distance location
AMCG00017193 atp2b2 coding upstream 92993 50045218 ~ 50061365 (+)
AMCG00017194 atp2b2,LOC107561799 coding upstream 122976 50011932 ~ 50031382 (+)
AMCG00017195 LOC107697566 coding upstream 156907 49993362 ~ 49997451 (+)
AMCG00017192 iars coding upstream 248777 49851298 ~ 49905581 (+)
AMCG00017190 NA coding upstream 323279 49821733 ~ 49831079 (+)
AMCG00017196 slc6a1,slc6a1b,LOC107746710,LOC107670967 coding downstream 23761 50178455 ~ 50190780 (+)
AMCG00017197 NA coding downstream 110965 50265659 ~ 50267149 (+)
AMCG00017198 atg7,LOC107697561,LOC106907352,LOC106911936 coding downstream 116537 50271231 ~ 50303625 (+)
AMCG00017204 NA coding downstream 248625 50403319 ~ 50403624 (+)
AMCG00017201 syn2,LOC107088169,LOC106904985,LOC102235059,LOC103145103,LOC103467585 coding downstream 286853 50441547 ~ 50445797 (+)
G18909 NA non-coding upstream 480432 49673085 ~ 49673926 (+)
G18908 alas1,LOC106566237,LOC103399559 non-coding upstream 484069 49582264 ~ 49670289 (+)
G18865 NA non-coding upstream 661009 49436264 ~ 49493349 (+)
G18791 NA non-coding upstream 943102 49206808 ~ 49211256 (+)
G18722 NA non-coding upstream 1827553 48322263 ~ 48326805 (+)
G19042 LOC103376870 non-coding downstream 759 50155453 ~ 50155825 (+)
G19058 NA non-coding downstream 177772 50332466 ~ 50333366 (+)
G19059 NA non-coding downstream 179066 50333760 ~ 50334506 (+)
G19061 NA non-coding downstream 186723 50341417 ~ 50342150 (+)
G19062 NA non-coding downstream 196558 50351252 ~ 50351947 (+)
AMCG00017183 NA other upstream 426791 49713467 ~ 49727567 (+)
AMCG00017173 NA other upstream 750513 49402531 ~ 49403845 (+)
AMCG00017167 NA other upstream 772140 49372022 ~ 49382218 (+)
AMCG00017099 cav3,LOC107673475,LOC107749619,LOC107584510,LOC107577493 other upstream 5192757 44949034 ~ 44961601 (+)
G18192 NA other upstream 5498260 44654652 ~ 44656098 (+)
G19113 NA other downstream 397186 50551880 ~ 50552985 (+)
G19114 raf1,LOC108276324 other downstream 404756 50559450 ~ 50563278 (+)
AMCG00017280 NA other downstream 2659559 52814253 ~ 52817369 (+)
AMCG00017287 NA other downstream 2666367 52821061 ~ 52834042 (+)
G19683 NA other downstream 3181215 53335909 ~ 53339655 (+)

Expression


Co-expression Network