G19042 (LOC103376870)


Basic Information

Item Value
gene id G19042
gene name LOC103376870
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 50155453 ~ 50155825 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU23628
ccattctcctctgacctctagcatcaacaaggcattttcgcccacaggactgacgcatactggatgtttttcccttttcacaccattctttgtaaaccctagaaatggttgtgcgtgaaaatcccagtaactgagcagattgtgaaatactcagaccggcccgtctggcaccaacaaccatgccacgctcaaaattgcttaaatcacctttctttcccattcagacattcagtttggagttcaggagattgtcttgaccaggaccacacccctaaatgcattgaagcaactgctatgtgattggttggttagataattgcattaatgagaaattgaacaggtgttcctaataatcctttaggtgagtgtatat

Function

NR:

description
PREDICTED: uncharacterized protein LOC103376870

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU23628 True 373 lncRNA 0.43 1 50155453 50155825

Neighbor

gene id symbol gene type direction distance location
AMCG00017193 atp2b2 coding upstream 94088 50045218 ~ 50061365 (+)
AMCG00017194 atp2b2,LOC107561799 coding upstream 124071 50011932 ~ 50031382 (+)
AMCG00017195 LOC107697566 coding upstream 158002 49993362 ~ 49997451 (+)
AMCG00017192 iars coding upstream 249872 49851298 ~ 49905581 (+)
AMCG00017190 NA coding upstream 324374 49821733 ~ 49831079 (+)
AMCG00017196 slc6a1,slc6a1b,LOC107746710,LOC107670967 coding downstream 22630 50178455 ~ 50190780 (+)
AMCG00017197 NA coding downstream 109834 50265659 ~ 50267149 (+)
AMCG00017198 atg7,LOC107697561,LOC106907352,LOC106911936 coding downstream 115406 50271231 ~ 50303625 (+)
AMCG00017204 NA coding downstream 247494 50403319 ~ 50403624 (+)
AMCG00017201 syn2,LOC107088169,LOC106904985,LOC102235059,LOC103145103,LOC103467585 coding downstream 285722 50441547 ~ 50445797 (+)
G19040 NA non-coding upstream 759 50154358 ~ 50154694 (+)
G18909 NA non-coding upstream 481527 49673085 ~ 49673926 (+)
G18908 alas1,LOC106566237,LOC103399559 non-coding upstream 485164 49582264 ~ 49670289 (+)
G18865 NA non-coding upstream 662104 49436264 ~ 49493349 (+)
G18791 NA non-coding upstream 944197 49206808 ~ 49211256 (+)
G19058 NA non-coding downstream 176641 50332466 ~ 50333366 (+)
G19059 NA non-coding downstream 177935 50333760 ~ 50334506 (+)
G19061 NA non-coding downstream 185592 50341417 ~ 50342150 (+)
G19062 NA non-coding downstream 195427 50351252 ~ 50351947 (+)
G19146 NA non-coding downstream 475553 50631378 ~ 50631634 (+)
AMCG00017183 NA other upstream 427886 49713467 ~ 49727567 (+)
AMCG00017173 NA other upstream 751608 49402531 ~ 49403845 (+)
AMCG00017167 NA other upstream 773235 49372022 ~ 49382218 (+)
AMCG00017099 cav3,LOC107673475,LOC107749619,LOC107584510,LOC107577493 other upstream 5193852 44949034 ~ 44961601 (+)
G18192 NA other upstream 5499355 44654652 ~ 44656098 (+)
G19113 NA other downstream 396055 50551880 ~ 50552985 (+)
G19114 raf1,LOC108276324 other downstream 403625 50559450 ~ 50563278 (+)
AMCG00017280 NA other downstream 2658428 52814253 ~ 52817369 (+)
AMCG00017287 NA other downstream 2665236 52821061 ~ 52834042 (+)
G19683 NA other downstream 3180084 53335909 ~ 53339655 (+)

Expression


Co-expression Network