G19043 (LOC103376870)


Basic Information

Item Value
gene id G19043
gene name LOC103376870
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 50155430 ~ 50155834 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU23629
attatatatatatacactcacctaaaggattattaggaacacctgttcaatttctcattaatgcaattatctaaccaaccaatcacatagcagttgcttcaatgcatttaggggtgtggtcctggtcaagacaatctcctgaactccaaactgaatgtctgaatgggaaagaaaggtgatttaagcaattttgagcgtggcatggttgttggtgccagacgggccggtctgagtatttcacaatctgctcagttactgggattttcacgcacaaccatttctagggtttacaaagaatggtgtgaaaagggaaaaacatccagtatgcgtcagtcctgtgggcgaaaatgccttgttgatgctagaggtcagaggagaatggccgactgattcaagctgatagaa

Function

NR:

description
PREDICTED: uncharacterized protein LOC103376870

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU23629 True 405 lncRNA 0.42 1 50155430 50155834

Neighbor

gene id symbol gene type direction distance location
AMCG00017191 NA coding downstream 310304 49844467 ~ 49845126 (-)
AMCG00017186 NA coding downstream 420083 49727583 ~ 49735347 (-)
AMCG00017187 NA coding downstream 448909 49697995 ~ 49706521 (-)
AMCG00017179 NA coding downstream 479596 49669201 ~ 49675834 (-)
AMCG00017180 poc1a,LOC108424582 coding downstream 502209 49644147 ~ 49653221 (-)
AMCG00017200 vgll4,LOC107570332 coding upstream 175937 50331771 ~ 50351799 (-)
AMCG00017199 tamm41,LOC106583779 coding upstream 221431 50377265 ~ 50384569 (-)
AMCG00017203 NA coding upstream 291551 50447385 ~ 50456112 (-)
AMCG00017208 NA coding upstream 367724 50523558 ~ 50526003 (-)
AMCG00017214 raf1,LOC106571905,LOC108427788 coding upstream 416282 50572116 ~ 50593081 (-)
G19030 atp2b2,LOC107561799,LOC107570616 non-coding downstream 83926 50060847 ~ 50071504 (-)
G18970 NA non-coding downstream 390238 49763197 ~ 49765192 (-)
G18962 NA non-coding downstream 428495 49726320 ~ 49726935 (-)
G18961 NA non-coding downstream 429755 49725197 ~ 49725675 (-)
G18945 LOC105893506,LOC108431510,LOC106566656,LOC107586924,LOC107593103,LOC107704447 non-coding downstream 446170 49707666 ~ 49709260 (-)
G19049 NA non-coding upstream 32060 50187894 ~ 50190884 (-)
G19055 NA non-coding upstream 114574 50270408 ~ 50270657 (-)
G19081 NA non-coding upstream 173344 50329178 ~ 50331737 (-)
G19130 NA non-coding upstream 375367 50531201 ~ 50621932 (-)
G19136 NA non-coding upstream 405189 50561023 ~ 50562916 (-)
AMCG00017178 NA other downstream 661286 49487197 ~ 49494144 (-)
AMCG00017158 NA other downstream 1661023 48489127 ~ 48494407 (-)
AMCG00017105 srgap3 other downstream 4994293 45118290 ~ 45161137 (-)
AMCG00017091 brk1,BRK1,LOC106565571 other downstream 5498525 44653455 ~ 44656905 (-)
AMCG00017067 sumf1 other downstream 6495828 43633770 ~ 43659602 (-)
AMCG00017232 NA other upstream 1028397 51184231 ~ 51212373 (-)
AMCG00017234 LOC100690894,LOC102799047,LOC102206238 other upstream 1274853 51430687 ~ 51435239 (-)
G19335 NA other upstream 1289753 51445587 ~ 51449786 (-)
AMCG00017251 actr8 other upstream 1690762 51846596 ~ 51860267 (-)
AMCG00017292 tusc2,LOC108433681,LOC104930950 other upstream 2702506 52858340 ~ 52866435 (-)

Expression


Co-expression Network