Gene
RNA
| Item | Value |
|---|---|
| gene id | G19055 |
| gene name | NA |
| gene type | non-coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030122.1 |
| NCBI id | CM030122.1 |
| chromosome length | 54868152 |
| location | 50270408 ~ 50270657 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | description |
|---|---|
| ko04622 | RIG-I-like receptor signaling pathway |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU23643 | True | 250 | lncRNA | 0.45 | 1 | 50270408 | 50270657 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00017191 | NA | coding | downstream | 425282 | 49844467 ~ 49845126 (-) |
| AMCG00017186 | NA | coding | downstream | 535061 | 49727583 ~ 49735347 (-) |
| AMCG00017187 | NA | coding | downstream | 563887 | 49697995 ~ 49706521 (-) |
| AMCG00017179 | NA | coding | downstream | 594574 | 49669201 ~ 49675834 (-) |
| AMCG00017180 | poc1a,LOC108424582 | coding | downstream | 617187 | 49644147 ~ 49653221 (-) |
| AMCG00017200 | vgll4,LOC107570332 | coding | upstream | 61114 | 50331771 ~ 50351799 (-) |
| AMCG00017199 | tamm41,LOC106583779 | coding | upstream | 106608 | 50377265 ~ 50384569 (-) |
| AMCG00017203 | NA | coding | upstream | 176728 | 50447385 ~ 50456112 (-) |
| AMCG00017208 | NA | coding | upstream | 252901 | 50523558 ~ 50526003 (-) |
| AMCG00017214 | raf1,LOC106571905,LOC108427788 | coding | upstream | 301459 | 50572116 ~ 50593081 (-) |
| G19049 | NA | non-coding | downstream | 79524 | 50187894 ~ 50190884 (-) |
| G19043 | LOC103376870 | non-coding | downstream | 114574 | 50155430 ~ 50155834 (-) |
| G19030 | atp2b2,LOC107561799,LOC107570616 | non-coding | downstream | 198904 | 50060847 ~ 50071504 (-) |
| G18970 | NA | non-coding | downstream | 505216 | 49763197 ~ 49765192 (-) |
| G18962 | NA | non-coding | downstream | 543473 | 49726320 ~ 49726935 (-) |
| G19081 | NA | non-coding | upstream | 58521 | 50329178 ~ 50331737 (-) |
| G19130 | NA | non-coding | upstream | 260544 | 50531201 ~ 50621932 (-) |
| G19136 | NA | non-coding | upstream | 290366 | 50561023 ~ 50562916 (-) |
| G19137 | NA | non-coding | upstream | 297693 | 50568350 ~ 50570723 (-) |
| G19141 | NA | non-coding | upstream | 351524 | 50622181 ~ 50622439 (-) |
| AMCG00017178 | NA | other | downstream | 776264 | 49487197 ~ 49494144 (-) |
| AMCG00017158 | NA | other | downstream | 1776001 | 48489127 ~ 48494407 (-) |
| AMCG00017105 | srgap3 | other | downstream | 5109271 | 45118290 ~ 45161137 (-) |
| AMCG00017091 | brk1,BRK1,LOC106565571 | other | downstream | 5613503 | 44653455 ~ 44656905 (-) |
| AMCG00017067 | sumf1 | other | downstream | 6610806 | 43633770 ~ 43659602 (-) |
| AMCG00017232 | NA | other | upstream | 913574 | 51184231 ~ 51212373 (-) |
| AMCG00017234 | LOC100690894,LOC102799047,LOC102206238 | other | upstream | 1160030 | 51430687 ~ 51435239 (-) |
| G19335 | NA | other | upstream | 1174930 | 51445587 ~ 51449786 (-) |
| AMCG00017251 | actr8 | other | upstream | 1575939 | 51846596 ~ 51860267 (-) |
| AMCG00017292 | tusc2,LOC108433681,LOC104930950 | other | upstream | 2587683 | 52858340 ~ 52866435 (-) |
