G19062


Basic Information

Item Value
gene id G19062
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 50351252 ~ 50351947 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU23651
aataacaatgcaaatacaaaacaccCAGCTGTGATTATGAAGAGCTCAGTATTTTCAGGAAACCGACTACATCCGAATGCTAATAAATTCGGATTAGTGCGggaccaaaacaaaaagtgcaataaaGCGGTTTACCGTCGTAGCACAGGATCCCGATGTTGTTGTTCATCTTGTCCAGATACTGGTAGTTCAACAGGTCCATTTTCGTAAGAAGCATTGATCGGGAGGGCAAAAAGACCAGCTTTTTCGCGTTGCACTTCCCGAGCTAAAGGCCCAGCCTTCAACTTTCCTCGCAGCCGAGCACCGCAGCACAAGCCCGCAGCTCCAGGCCGACGCCGCGCCGAGACTGGGCTTCTCTCGACGACCGCCCTTGAGGTTTTTGGAAACTTGGGGTGACTGCTTTACTTCTCAAAGGCTGTGAAAGTGTGCTGCTGGGACAAAAGAGACGCGCCAGTCGTCCTCACAGCCCGCTGCAAGTTAACTGCACTGCCATGCAGGCTATGCTCGGTATGGCTCGTATGTGAGCAGTTTCCTCCGCTGGGGCTGCGGCCACTGCGCCTGCGCGTCACATCCCTGGAGCGCCTCAAATGTCAGGGATTGTTTCTGCACAAGATCAGCCTCCAAACGCACCGAGGCCCAGAGGGGCACGAAACATCTCACACAAAGGGCTCTTTTCAAGGCTGCCGTGTCACCTCG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU23651 True 696 lncRNA 0.53 1 50351252 50351947

Neighbor

gene id symbol gene type direction distance location
AMCG00017198 atg7,LOC107697561,LOC106907352,LOC106911936 coding upstream 47627 50271231 ~ 50303625 (+)
AMCG00017197 NA coding upstream 84103 50265659 ~ 50267149 (+)
AMCG00017196 slc6a1,slc6a1b,LOC107746710,LOC107670967 coding upstream 160472 50178455 ~ 50190780 (+)
AMCG00017193 atp2b2 coding upstream 289887 50045218 ~ 50061365 (+)
AMCG00017194 atp2b2,LOC107561799 coding upstream 319870 50011932 ~ 50031382 (+)
AMCG00017204 NA coding downstream 51372 50403319 ~ 50403624 (+)
AMCG00017201 syn2,LOC107088169,LOC106904985,LOC102235059,LOC103145103,LOC103467585 coding downstream 89600 50441547 ~ 50445797 (+)
AMCG00017202 syn2,LOC107742035,LOC107571222,LOC107667867 coding downstream 107016 50458963 ~ 50476755 (+)
AMCG00017205 NA coding downstream 149096 50501043 ~ 50513355 (+)
AMCG00017206 NA coding downstream 165095 50517042 ~ 50522542 (+)
G19061 NA non-coding upstream 9102 50341417 ~ 50342150 (+)
G19059 NA non-coding upstream 16746 50333760 ~ 50334506 (+)
G19058 NA non-coding upstream 17886 50332466 ~ 50333366 (+)
G19042 LOC103376870 non-coding upstream 195427 50155453 ~ 50155825 (+)
G19040 NA non-coding upstream 196558 50154358 ~ 50154694 (+)
G19146 NA non-coding downstream 279431 50631378 ~ 50631634 (+)
G19152 NA non-coding downstream 288640 50640587 ~ 50640802 (+)
G19195 NA non-coding downstream 375793 50727740 ~ 50728151 (+)
G19245 NA non-coding downstream 785346 51137293 ~ 51138835 (+)
G19275 NA non-coding downstream 943885 51295832 ~ 51296718 (+)
AMCG00017183 NA other upstream 623685 49713467 ~ 49727567 (+)
AMCG00017173 NA other upstream 947407 49402531 ~ 49403845 (+)
AMCG00017167 NA other upstream 969034 49372022 ~ 49382218 (+)
AMCG00017099 cav3,LOC107673475,LOC107749619,LOC107584510,LOC107577493 other upstream 5389651 44949034 ~ 44961601 (+)
G18192 NA other upstream 5695154 44654652 ~ 44656098 (+)
G19113 NA other downstream 199933 50551880 ~ 50552985 (+)
G19114 raf1,LOC108276324 other downstream 207503 50559450 ~ 50563278 (+)
AMCG00017280 NA other downstream 2462306 52814253 ~ 52817369 (+)
AMCG00017287 NA other downstream 2469114 52821061 ~ 52834042 (+)
G19683 NA other downstream 2983962 53335909 ~ 53339655 (+)

Expression


Co-expression Network