G19113


Basic Information

Item Value
gene id G19113
gene name NA
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 50551880 ~ 50552985 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU23710
CAGAGACTGGCAGTGTCCAGCTCATCTCATTGGTTAAGCTCCATTGTTTAAGTGTCGTGTTTGACAGGTGTGAACCTTCAGGCTTTGGAACAGTGTGATGTTGTGGCCCTGTGTTTTCAGAAGGAGTCAGATCTGGAGAACTCTGAGCTTTGTGTTTCTGAACTCGGTGCGGCTGTGGGACTTCATCGAGGAGCGCGAGCAGCGGGGGGGCAGGCCGTACGAGGACCAGGTCAGCGAGCTGGGGGAGCTGTTCATGCAACTCTCCGGGGCCGACACGGACGGAGCCATCCCAGCCCCTCTGCTCCCGCATCACTAACCCCTGCACTCCTACCTTTCGGAGTCAGAGTCCAGCTTATGGTCGTGTTTTACTTCACTCCTCGGGCCACAATAACATATCAAATTGCAGCTTAATGGGTAATAATGGGCAATAAAAGTATACTCTCTCGTCCGCCCAGCAGCGGTTGAAGATCTCATGTTANN

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU23710 True 480 TUCP 0.53 2 50551880 50552985

Neighbor

gene id symbol gene type direction distance location
AMCG00017207 NA coding upstream 14210 50526813 ~ 50537670 (+)
AMCG00017206 NA coding upstream 29338 50517042 ~ 50522542 (+)
AMCG00017205 NA coding upstream 38525 50501043 ~ 50513355 (+)
AMCG00017202 syn2,LOC107742035,LOC107571222,LOC107667867 coding upstream 75125 50458963 ~ 50476755 (+)
AMCG00017201 syn2,LOC107088169,LOC106904985,LOC102235059,LOC103145103,LOC103467585 coding upstream 106083 50441547 ~ 50445797 (+)
AMCG00017212 LOC106583855,LOC107742030 coding downstream 62254 50615239 ~ 50621947 (+)
AMCG00017210 isy1,LOC108431508,LOC107700632,LOC108254962 coding downstream 79123 50632108 ~ 50638968 (+)
AMCG00017211 NA coding downstream 92127 50645112 ~ 50652585 (+)
AMCG00017209 NA coding downstream 111341 50664326 ~ 50672185 (+)
AMCG00017217 NA coding downstream 143861 50696846 ~ 50711492 (+)
G19062 NA non-coding upstream 199933 50351252 ~ 50351947 (+)
G19061 NA non-coding upstream 209730 50341417 ~ 50342150 (+)
G19059 NA non-coding upstream 217374 50333760 ~ 50334506 (+)
G19058 NA non-coding upstream 218514 50332466 ~ 50333366 (+)
G19042 LOC103376870 non-coding upstream 396055 50155453 ~ 50155825 (+)
G19146 NA non-coding downstream 78393 50631378 ~ 50631634 (+)
G19152 NA non-coding downstream 87602 50640587 ~ 50640802 (+)
G19195 NA non-coding downstream 174755 50727740 ~ 50728151 (+)
G19245 NA non-coding downstream 584308 51137293 ~ 51138835 (+)
G19275 NA non-coding downstream 742847 51295832 ~ 51296718 (+)
AMCG00017183 NA other upstream 824313 49713467 ~ 49727567 (+)
AMCG00017173 NA other upstream 1148035 49402531 ~ 49403845 (+)
AMCG00017167 NA other upstream 1169662 49372022 ~ 49382218 (+)
AMCG00017099 cav3,LOC107673475,LOC107749619,LOC107584510,LOC107577493 other upstream 5590279 44949034 ~ 44961601 (+)
G18192 NA other upstream 5895782 44654652 ~ 44656098 (+)
G19114 raf1,LOC108276324 other downstream 6465 50559450 ~ 50563278 (+)
AMCG00017280 NA other downstream 2261268 52814253 ~ 52817369 (+)
AMCG00017287 NA other downstream 2268076 52821061 ~ 52834042 (+)
G19683 NA other downstream 2782924 53335909 ~ 53339655 (+)
G19754 NA other downstream 2950447 53503432 ~ 53536464 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_003796 CU695207.1 coding NC_007122.7 CM002895.2 543362 ~ 575786 (-)
grasscarp (Ctenopharyngodon idella) CI01000057_04635274_04644405 NA coding CI01000057 null 4635217 ~ 4644405 (-)