G19136


Basic Information

Item Value
gene id G19136
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 50561023 ~ 50562916 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU23740
GTCAGCACTGATTACTTAAATAGAgctaaaaccaaaaacaatccAATGCTCACATctcttaattttgtttccatatgGGGTGATTGCATGACAGGAAAATATAGTAATTGTGTGCACAGCACCAACAAGAGATTTTCCCTTAAAGTTTACCTGCAGTTAAGGTTCATACCATAGAGGCTGGGATTTCATGACGTTGGGAATAATTGTGTAGTATTGTCCTACTTTTTACCAATTTTACACTTCCATTTCATGGGTTTGTGCAGCATTGTTTCACCATTAAGTGAAACTTAACTGCTAAATGGAGAAGAATCAAGAGGTTTTCAACAGGTTTGCAGTTCTTGGTTTTCTTGAATCCTGTAACTGTTCCAAACGATCCTGTTGAATTCGTTTCCCGCAGTCTTGAAAAGTAGTCTGGCTCTCCGTGTGTCGGCCATCGCGCTGTTTCCCCATTAGATGGAGGGGCAGTAAGAAAACTAGGAACAAAGCTTCATGTCCTTCATACAACTGAATACCCTCTCTCACCTGTTAAGTTCTTATTATTGGTGCTGCAGTGTGATTGCACCGGCTGCAGtgatacacatacatacactggattgcactgttgtgttgtttttgttccgTCTGTTGAGCTGAGGGTATTTGGCCTGGATGGGGTGGGGCAGGGAGGCGGTGCTAGAACACAGGCAGCCTCATGGAGGTCAAAGTGCATGAGTTGATGTCTTCGGTGTGCGAGGCTCGATGGAGGGACGGCTCCGAGGCACTGCGGTTGATTTTGGGCAGCGAGTGCTGCAGCAGTTCTATCGAGGACAAGATCTGAAAGGCAGAACAGAGCTGTGAATGTGGGTCACTTCAAAGCGCACACTGATGGGGCTACAGTTCAGTCTGATGAAAC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU23740 True 892 lncRNA 0.45 2 50561023 50562916

Neighbor

gene id symbol gene type direction distance location
AMCG00017208 NA coding downstream 35020 50523558 ~ 50526003 (-)
AMCG00017203 NA coding downstream 104911 50447385 ~ 50456112 (-)
AMCG00017199 tamm41,LOC106583779 coding downstream 176454 50377265 ~ 50384569 (-)
AMCG00017200 vgll4,LOC107570332 coding downstream 209224 50331771 ~ 50351799 (-)
AMCG00017191 NA coding downstream 715897 49844467 ~ 49845126 (-)
AMCG00017214 raf1,LOC106571905,LOC108427788 coding upstream 9200 50572116 ~ 50593081 (-)
AMCG00017215 LOC108254961,LOC107700631,LOC106571904,LOC106566758,LOC108431553 coding upstream 80494 50643410 ~ 50652954 (-)
AMCG00017213 rab43,LOC107700634,LOC107758163,LOC107675972 coding upstream 93203 50656119 ~ 50663669 (-)
AMCG00017216 NA coding upstream 107672 50670588 ~ 50671364 (-)
AMCG00017220 LOC107581369 coding upstream 113335 50676251 ~ 50679198 (-)
G19081 NA non-coding downstream 229286 50329178 ~ 50331737 (-)
G19055 NA non-coding downstream 290366 50270408 ~ 50270657 (-)
G19049 NA non-coding downstream 370139 50187894 ~ 50190884 (-)
G19043 LOC103376870 non-coding downstream 405189 50155430 ~ 50155834 (-)
G19030 atp2b2,LOC107561799,LOC107570616 non-coding downstream 489519 50060847 ~ 50071504 (-)
G19137 NA non-coding upstream 5434 50568350 ~ 50570723 (-)
G19141 NA non-coding upstream 59265 50622181 ~ 50622439 (-)
G19150 isy1,LOC108431508,LOC107700632,LOC108254962 non-coding upstream 74399 50637315 ~ 50638771 (-)
G19259 NA non-coding upstream 602442 51165358 ~ 51165675 (-)
G19316 NA non-coding upstream 732915 51295831 ~ 51296743 (-)
AMCG00017178 NA other downstream 1066879 49487197 ~ 49494144 (-)
AMCG00017158 NA other downstream 2066616 48489127 ~ 48494407 (-)
AMCG00017105 srgap3 other downstream 5399886 45118290 ~ 45161137 (-)
AMCG00017091 brk1,BRK1,LOC106565571 other downstream 5904118 44653455 ~ 44656905 (-)
AMCG00017067 sumf1 other downstream 6901421 43633770 ~ 43659602 (-)
AMCG00017232 NA other upstream 621315 51184231 ~ 51212373 (-)
AMCG00017234 LOC100690894,LOC102799047,LOC102206238 other upstream 867771 51430687 ~ 51435239 (-)
G19335 NA other upstream 882671 51445587 ~ 51449786 (-)
AMCG00017251 actr8 other upstream 1283680 51846596 ~ 51860267 (-)
AMCG00017292 tusc2,LOC108433681,LOC104930950 other upstream 2295424 52858340 ~ 52866435 (-)

Expression


Co-expression Network