G19663


Basic Information

Item Value
gene id G19663
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 53009878 ~ 53010218 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU24389
gtccccgggtgcgtgtgtccctgctgatctggaaaagctcctctggtttgatgtggtcgatgcccttcatgattttgaagacttggatcaagtccccacgtagtctcctctgttccaggtgaaaaggttcagttcctcagtctctcagtaggacattcccttcagacctggaataagtctggttgctctcctctgaactgcctctagagcagcgatatctttcttgaagtgtggagcccagaactgtccacagtatccagatgagctctaactagtgcattgtacagtctgaacatcactgcccttgttctcaattctacacttttgacaatataccctag

Function

NR:

description
PREDICTED: huntingtin-interacting protein 1 isoform X1

GO:

id name namespace
GO:0008454 alpha-1,3-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU24389 True 341 lncRNA 0.48 1 53009878 53010218

Neighbor

gene id symbol gene type direction distance location
AMCG00017291 tmem115 coding downstream 80039 52924823 ~ 52929839 (-)
AMCG00017293 nprl2 coding downstream 91934 52912823 ~ 52917944 (-)
AMCG00017294 NA coding downstream 97235 52904340 ~ 52912643 (-)
AMCG00017296 NA coding downstream 109753 52884475 ~ 52900125 (-)
AMCG00017295 NA coding downstream 128865 52868327 ~ 52881013 (-)
AMCG00017298 NA coding upstream 272247 53282465 ~ 53286478 (-)
AMCG00017302 LOC107696462 coding upstream 329288 53339506 ~ 53343302 (-)
AMCG00017309 NA coding upstream 382490 53392708 ~ 53396408 (-)
AMCG00017310 NA coding upstream 386402 53396620 ~ 53396829 (-)
AMCG00017312 sema3b coding upstream 525629 53535847 ~ 53557888 (-)
G19604 NA non-coding downstream 240463 52768902 ~ 52769415 (-)
G19551 NA non-coding downstream 318692 52679953 ~ 52691186 (-)
G19548 NA non-coding downstream 344696 52649008 ~ 52665182 (-)
G19516 NA non-coding downstream 461828 52547737 ~ 52548050 (-)
G19330 NA non-coding downstream 1571785 51437880 ~ 51438093 (-)
G19687 NA non-coding upstream 227988 53238206 ~ 53238409 (-)
G19741 NA non-coding upstream 407967 53418185 ~ 53419077 (-)
G19873 NA non-coding upstream 843765 53853983 ~ 53854628 (-)
G19875 NA non-coding upstream 854692 53864910 ~ 53868777 (-)
G19918 NA non-coding upstream 884118 53894336 ~ 53914876 (-)
AMCG00017292 tusc2,LOC108433681,LOC104930950 other downstream 143443 52858340 ~ 52866435 (-)
AMCG00017251 actr8 other downstream 1149611 51846596 ~ 51860267 (-)
G19335 NA other downstream 1560092 51445587 ~ 51449786 (-)
AMCG00017234 LOC100690894,LOC102799047,LOC102206238 other downstream 1574639 51430687 ~ 51435239 (-)
AMCG00017232 NA other downstream 1797505 51184231 ~ 51212373 (-)
AMCG00017299 NA other upstream 184615 53194833 ~ 53215336 (-)
G19730 NA other upstream 373122 53383340 ~ 53387709 (-)
AMCG00017313 NA other upstream 441900 53452118 ~ 53531131 (-)
G19808 NA other upstream 665865 53676083 ~ 53728883 (-)
G19824 NA other upstream 752780 53762998 ~ 53764376 (-)

Expression


Co-expression Network