G19754


Basic Information

Item Value
gene id G19754
gene name NA
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 53503432 ~ 53536464 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU24512
ACAAGACAGATTAGCACTGTGCACAATGCACAACCGGGCCAAATCCCTGGgctgacacacccacacacacacacacacacacacacgcacacactcacacgcactcacacacactctcacacgcacacacacacacacattcacccacccacacacatacacactcacacacacgcatacactcacactcacacacacccacacactctcacacacacccacacactcacacacacacgcacactctctgtcactctcactcacacacacactcacacacacacacacacagagacacacacacacacagacacacacacagagacacacagacacactcacacacacacacacaactccggttactgttattaatattattattattattattattattattattattattattattattattactgacaTCACTTTGACATCAATATGACAATGGTCTGTCCTTAAATAAAACGGTAATGCTCAACTTAAATAGCTTAAGGCGTCTCATTCTGATTCCGTAGTAAGGTGTCCAGGACACATTCGTCAGATGCACAAACACAagacaatgacacacacaaccTGTAAGGTGAGGCGTGAGGTGAGACCCGCTTCTCTGGAGCGTCTCTGTCGGCCGCTGTCCGTCAAGGTGAGGCTCAGTAGGACACCGGCAGACTCTGTCCCCAAAATCAGTACCCTGAGCCCCCCGAAACACCCACGACAAACACCTCCTACACAACTTAAACACCCGAACCGTCGTGGTGTTGTCTTTGGTTCTGTTTTCTCTGGAGTTTGCTAGGAAATGCATTTGGATTGTAATGAATTGTGTCAGCAGGACCTGGGCGGCCCGGGACATTCAATTCGATTCCCCCCCATCCTTCAGAAGCAgagcaaacacacaacactgatcAATGACCGATCAGCTCCGTCCCCTGGACCTCCTCTGATCCCCCAACAACGACCGATCATCCCTCGCTCTCTGTGTCGTCTCTGCTGTCCATTGTGGTGGTTAATGTGCGAGCTCTTCAGAGAGACGGAGGACGTGGAGGTGTCTCGGGCGTCTCCGAAGCGGTTTGCAGTGGCAAGGGTCGCAGAGAGAGCTGGTCTCACTAGGAGGGCCGGGGGTTCGGCCTCTGAGCTCTTAGTTTaacaggaataaaaaaagagaagcaagaaaaaatatgtacagtatatatatctGTAAGAGCAAAGTCCAAGTCCAAGCTCATCGTCCGAGCTTTGACTCCATACGGTCacgagctgtgtgtgtgtgtgtgcttgtgtgtccgtgtgtgtgcttgtgtgcgtTATTCCAGTTAAGGAGTTTAGAgaggaaaaattaaattatatatatatatatatatataaatatataaacaaacgaCAACAACCACCAAAGAATGGAGCAGCAGGGAGGGGGTCCTGGGATTGAGGTGATTGGGTGGGTCGTGTCCGGCCCCCCAGTCAGGGGAGGCTTCAGGGCTCAGTTGAGGGGGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU24512 True 1497 TUCP 0.49 2 53503432 53536464

Neighbor

gene id symbol gene type direction distance location
AMCG00017305 NA coding upstream 74371 53419540 ~ 53429061 (+)
AMCG00017306 NA coding upstream 84298 53409380 ~ 53419134 (+)
AMCG00017304 NA coding upstream 94594 53398855 ~ 53408838 (+)
AMCG00017308 NA coding upstream 110840 53388384 ~ 53392592 (+)
AMCG00017307 NA coding upstream 115719 53380895 ~ 53387713 (+)
AMCG00017314 NA coding downstream 123034 53659498 ~ 53669772 (+)
AMCG00017319 LOC106566567,LOC105013928,LOC102296397,LOC101473935,LOC102778284,LOC103370863 coding downstream 138414 53674878 ~ 53689906 (+)
AMCG00017323 NA coding downstream 186070 53722534 ~ 53734975 (+)
AMCG00017330 celsr3,LOC107591847,LOC107679402 coding downstream 280808 53817272 ~ 53821473 (+)
AMCG00017326 celsr3,LOC106566780 coding downstream 294407 53830871 ~ 53834907 (+)
G19729 NA non-coding upstream 94132 53408965 ~ 53409300 (+)
G19679 NA non-coding upstream 168048 53306095 ~ 53335384 (+)
G19674 NA non-coding upstream 182494 53276881 ~ 53320938 (+)
G19675 NA non-coding upstream 220226 53239106 ~ 53283206 (+)
G19664 NA non-coding upstream 478498 53024625 ~ 53024934 (+)
G19789 NA non-coding downstream 135520 53671984 ~ 53673814 (+)
G19836 NA non-coding downstream 277321 53813785 ~ 53813987 (+)
G19838 NA non-coding downstream 279381 53815845 ~ 53816076 (+)
G19889 NA non-coding downstream 376354 53912818 ~ 53914877 (+)
G19899 NA non-coding downstream 412294 53948758 ~ 54041033 (+)
G19683 NA other upstream 163777 53335909 ~ 53339655 (+)
AMCG00017287 NA other upstream 669390 52821061 ~ 52834042 (+)
AMCG00017280 NA other upstream 686063 52814253 ~ 52817369 (+)
G19114 raf1,LOC108276324 other upstream 2940154 50559450 ~ 50563278 (+)
G19113 NA other upstream 2950447 50551880 ~ 50552985 (+)
G19829 NA other downstream 254083 53790547 ~ 53792694 (+)
AMCG00017325 nckipsd other downstream 258162 53794626 ~ 53805796 (+)
G19854 NA other downstream 317443 53853907 ~ 53855839 (+)
G19860 NA other downstream 327644 53864108 ~ 53864718 (+)
AMCG00017331 NA other downstream 378661 53915125 ~ 53936482 (+)

Expression


Co-expression Network