G19854


Basic Information

Item Value
gene id G19854
gene name NA
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 53853907 ~ 53855839 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU24632
ATCATCCTTATTATCTgtaaacaaatagaaataaacaaatttattttattttattttattttattaatataaaatcacGCTGACCCCCTCCTTCACTCTCCCCTTAACTCAGGAGCTTCTCAACATCCCAGATTTACAGACTGAGCTATGGACCAGGTGGGATATAAactcatacacactcacacccacacactgtctcgctctctcacacacacacccacacactgtctcgctctcacacacacacacactgtctcgctcttacacacacacacacacacggttaAATGGACTGATAAAAGTGAAATGTGTATAGATGGATGGACAGACAGTTAGATATGCATGGAGAGCTATAAAAGATGTGTCGATAGACAGGTTATAttgatatgtatgtgtatatagagagacagacagacgggtacttggagacagagggacacagacaggtagatatgtatgtatgtacagacaTACAGGCCCAGTATATTGTTGTGAACAGAGTGTGAAGAATGTGAAAACACATTCAGACGTGGGCTGCAAATAAATTGTCCCAAAGAAAAGCAATCAATACGCACTCAATTACAAATCaatacttaaataattaatttaacaaacaaacaaacaaataaataaatatatttatatattttttaaagtcatttGTGGTTGAAGGGGACTTTTGATGACTCCTGAGTTAATGAAGGGGTTCATCTGACATTCGCATATACTGTACACCTTCCCagcaccctccctccctcccaccctccccagctccctccccatccctctctccagcACAGTTACATCCATTCAGTCATTCTACAATCGTCGCCCCGTCTCCCTCTGACAGCCTGTCCCAGCTGTACGCTCACTCCCCCTGCTGACTGGGACAGGAACAGCGGCGAGTGTGtgcacgctctctctctctacccttCCCTCTCTTTtgctccctctttccctctccctccctcactctctctctctctggttctctctgtcctcctgtGTCCACGGCGCAGTTTTAgggagaaaaattaaataaaacagcacgATAAGAAATATTAGCGTCTCTGATGAAAAAGATACAAAACgtataaaaaaaagtctgttttcattttttcccccttggtttgctttttgtatttgtttttgtcgcTCTTATTCTTGCTTTTGTTTCGCGTTTTTCTCTCTTTACTTCTCCTGTTGTAAaagtttgtgtgagtgtgtgtgtgtgtgtgtgtgtgtgtctgttctcAGGTCTCTGATTGGCGATCAGTGGGTGGTAGGTGGGTGGGGAGGGCTGATCCATGACCCCagccctcctctctctccctccctccctccttctctccctccgtCTCCCTCCGTGTCTGCGTTTggtcctgctcctcctccttctcttccACTTCCTCTGGCTGATGCCACACAGCGCCCCCACCTGGCTCCACAGCCCCCCAGCAGGGTTGAGTCCTCCTGCTTCATGATGCCTCGGGGGGGAGGCGGCTCGGTCAGGCCGCTCCTGTCCTGTGTAGGGCTGGGGGGGGGACGGACAGCGCGGGAGCCACAGACACACGGCAATGTGGGACACGAGTGGTGTCATCAAGACTGCCCTTCACTTCTGTGGACTCtggccagggagagagagagagagagtttgatGGAGCTGGacctggacagagagagacagaagatgGACAGGCAGAGACAGACGGACAAAGAGAGAATTAAACACACAACTAGacccagagacagacagaagaacagagagagacagacagagggacacagagcaagagggacagagacagtcTAAGAGAccgacacagagacagacatctGTAAAAACTGGGAGCAAATgggaagaagggagagaggaggtgAGGAGGAGTGTTGGGGGGACACTTACTCAGAGTCGGGGGAGATCTCGGAGATG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU24632 True 1933 TUCP 0.48 1 53853907 53855839

Neighbor

gene id symbol gene type direction distance location
AMCG00017326 celsr3,LOC106566780 coding upstream 19000 53830871 ~ 53834907 (+)
AMCG00017330 celsr3,LOC107591847,LOC107679402 coding upstream 32434 53817272 ~ 53821473 (+)
AMCG00017323 NA coding upstream 118932 53722534 ~ 53734975 (+)
AMCG00017319 LOC106566567,LOC105013928,LOC102296397,LOC101473935,LOC102778284,LOC103370863 coding upstream 164001 53674878 ~ 53689906 (+)
AMCG00017314 NA coding upstream 184135 53659498 ~ 53669772 (+)
AMCG00017324 NA coding downstream 20747 53876586 ~ 53883504 (+)
AMCG00017335 LOC108435819,LOC108440644,LOC107712078,LOC107721176 coding downstream 157722 54013561 ~ 54033037 (+)
AMCG00017336 NA coding downstream 180675 54036514 ~ 54056665 (+)
AMCG00017340 NA coding downstream 297768 54153607 ~ 54170510 (+)
AMCG00017347 NA coding downstream 349293 54205132 ~ 54208721 (+)
G19838 NA non-coding upstream 37831 53815845 ~ 53816076 (+)
G19836 NA non-coding upstream 39920 53813785 ~ 53813987 (+)
G19789 NA non-coding upstream 180093 53671984 ~ 53673814 (+)
G19751 NA non-coding upstream 320033 53452130 ~ 53533874 (+)
G19729 NA non-coding upstream 444607 53408965 ~ 53409300 (+)
G19889 NA non-coding downstream 56979 53912818 ~ 53914877 (+)
G19899 NA non-coding downstream 92919 53948758 ~ 54041033 (+)
G19887 NA non-coding downstream 103624 53959463 ~ 53961838 (+)
G19958 NA non-coding downstream 201021 54056860 ~ 54057920 (+)
G20006 NA non-coding downstream 315376 54171215 ~ 54171423 (+)
AMCG00017325 nckipsd other upstream 48111 53794626 ~ 53805796 (+)
G19829 NA other upstream 61213 53790547 ~ 53792694 (+)
G19754 NA other upstream 317443 53503432 ~ 53536464 (+)
G19683 NA other upstream 514252 53335909 ~ 53339655 (+)
AMCG00017287 NA other upstream 1019865 52821061 ~ 52834042 (+)
G19860 NA other downstream 8269 53864108 ~ 53864718 (+)
AMCG00017331 NA other downstream 59286 53915125 ~ 53936482 (+)
G19896 NA other downstream 83698 53939537 ~ 53947618 (+)
G19956 NA other downstream 198961 54054800 ~ 54055175 (+)
G19961 NA other downstream 208519 54064358 ~ 54066187 (+)

Expression


Co-expression Network