Gene
RNA
| Item | Value |
|---|---|
| gene id | G19918 |
| gene name | NA |
| gene type | non-coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030122.1 |
| NCBI id | CM030122.1 |
| chromosome length | 54868152 |
| location | 53894336 ~ 53914876 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | name | namespace |
|---|---|---|
| GO:0030168 | platelet activation | biological_process |
| GO:0007596 | blood coagulation | biological_process |
| GO:0050817 | coagulation | biological_process |
| id | description |
|---|---|
| ko04610 | Complement and coagulation cascades |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU24721 | True | 262 | lncRNA | 0.58 | 3 | 53894336 | 53914876 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00017333 | impdh2,LOC102785462 | coding | downstream | 3688 | 53884651 ~ 53890648 (-) |
| AMCG00017327 | NA | coding | downstream | 29792 | 53857096 ~ 53864544 (-) |
| AMCG00017328 | NA | coding | downstream | 42362 | 53835650 ~ 53851974 (-) |
| AMCG00017329 | NA | coding | downstream | 66461 | 53825558 ~ 53827875 (-) |
| AMCG00017322 | NA | coding | downstream | 110612 | 53782826 ~ 53783724 (-) |
| AMCG00017332 | tmem110,LOC108435844,LOC106582935,LOC107656046,LOC107755187,LOC103359875 | coding | upstream | 45945 | 53960821 ~ 53972368 (-) |
| AMCG00017338 | NA | coding | upstream | 59257 | 53974133 ~ 53986709 (-) |
| AMCG00017339 | NA | coding | upstream | 81229 | 53996105 ~ 54008920 (-) |
| AMCG00017337 | NA | coding | upstream | 143153 | 54058029 ~ 54062385 (-) |
| AMCG00017341 | NA | coding | upstream | 149493 | 54064369 ~ 54091597 (-) |
| G19875 | NA | non-coding | downstream | 25559 | 53864910 ~ 53868777 (-) |
| G19873 | NA | non-coding | downstream | 39708 | 53853983 ~ 53854628 (-) |
| G19741 | NA | non-coding | downstream | 475259 | 53418185 ~ 53419077 (-) |
| G19687 | NA | non-coding | downstream | 655927 | 53238206 ~ 53238409 (-) |
| G19663 | NA | non-coding | downstream | 884118 | 53009878 ~ 53010218 (-) |
| G19957 | NA | non-coding | upstream | 139960 | 54054836 ~ 54055099 (-) |
| G19992 | NA | non-coding | upstream | 142009 | 54056885 ~ 54057927 (-) |
| G20066 | NA | non-coding | upstream | 454876 | 54369752 ~ 54370666 (-) |
| G20078 | NA | non-coding | upstream | 537745 | 54452621 ~ 54454276 (-) |
| G20116 | LOC106929785,LOC108235569,LOC103465231,LOC103143233,LOC106950531,LOC105927081,LOC106517999 | non-coding | upstream | 580059 | 54494935 ~ 54498038 (-) |
| G19824 | NA | other | downstream | 129960 | 53762998 ~ 53764376 (-) |
| G19808 | NA | other | downstream | 165453 | 53676083 ~ 53728883 (-) |
| AMCG00017313 | NA | other | downstream | 363205 | 53452118 ~ 53531131 (-) |
| G19730 | NA | other | downstream | 506627 | 53383340 ~ 53387709 (-) |
| AMCG00017299 | NA | other | downstream | 679000 | 53194833 ~ 53215336 (-) |
| AMCG00017334 | NA | other | upstream | 38418 | 53953294 ~ 53957473 (-) |
| G19950 | NA | other | upstream | 117763 | 54032639 ~ 54034161 (-) |
| G19998 | eefsec,LOC107568193,LOC107667374,LOC107712058,LOC107584423 | other | upstream | 202388 | 54117264 ~ 54154094 (-) |
| AMCG00017343 | NA | other | upstream | 212811 | 54127687 ~ 54145216 (-) |
| G20064 | NA | other | upstream | 451908 | 54366784 ~ 54368016 (-) |
