G19950


Basic Information

Item Value
gene id G19950
gene name NA
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 54032639 ~ 54034161 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU24763
CCAATTAAGCAGAGAGGGAGTCCTGGAACACAGAGCCACAGGCAGTCATTGGGAAGATGGTTTATTAAGGTGTAATGGGTGATGACAGTAAAAAAGCACATCCTGAACTCAGTGATAGATCTGTTaagagcaatatatatatacagcaccTTACTgcgtatttatttctgtgtatttaatctgtatcgtttttaatatattttaattaaataactatattCAAGTAAAGTCACGCCGATTTCACACTCGACCGACATGCGCAGCGCACAgccgccacccccacccccggacAGCCACCTCTCCACAGTGGGGGTGTGGCAGCAGCCCGACAGAAGATCCCAAAGTGACAGGCCGTGTGTCAGTAAGCGTATGTTTACATGTAAGCgtgtggtgtgggggggtgctaCTGGCACCCAGAggtgcactgtgctgtactgacaCACGACGCCGGGCCgagtcacacatacacacgcagaCTTTCACTCACTAACACGACACTGggctcttacacacacacgcacccatGCCAGCCACACCAGGGCGCTCAGACTGCGGTGCCGCGGGTTTGTCCCCTGTGGTGTCCCTCAGTCCCTGTCCAGAGCACAGTGGGTCCGAGAGCCCGGAAAGGGGATAATGTTTTACTCATGAATTTatttaactacaattaaaacacacaccgCCTCGGCAATGAAGAGCATGCAGAGCTATAAttaggatttatatatataaatattgtattacacacAGGTTTGGAGAGGGGACAAAACTGCTGCTCTGGAGAAGAACATCTgaaagtgtgtgcatgtgtgtgtgcgcgtgtgtgtgtgtgtgtgggtgcctTCTCCCACCCCGAGCCAACAGCAGTGTAGATGCAGTGAAGCACCTGACCCCACCCGCAGACCCTGCACCCCCAGAGTGAGCCACGACACGAAGGAACCGATATCTTACAATCACATTGTTACAGTACAGTTCACCcacaagtttaatttattatcatacaattttatttaaagtttatttaaaagttgATCTTAACGAATAAAAGACTATCGATCACCTACAACACATCGCGCCtcacactcccccccccccccNNNNNNNNNNCTGTGTAACTGGACTGTCACCCCAACGCCATGCTCACCCCGCGCCCCTGCCCCTCTCACGCCGCTGCCTCTGCGCCGCGGGGGAATGTCTCGGGACAGGCCCGGCCCACTGAGGGCCCTGGATGGGTGGGGCAGGATGAGAGCCGGGTGGGGCTCCCGCAGGCCCCGCCCATCAGTTGTCCATGAGCTGCTCCATGCGTGGGTTGATGAAGGAGAAGCCACTGAAGGCCGTCTGGTCCATGGAGTCGATGAAGTTCTTGTCGCTGTGGGACAGACGCGGCTTCTCGCTCAGGAACTCGCGGTCGAAGTTGCTGCAGTCACTGGGGGATTTCTgtggcacagagagagggagagggaaagggagggagagaggtgg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU24763 True 1479 TUCP 0.52 3 54032639 54034161

Neighbor

gene id symbol gene type direction distance location
AMCG00017339 NA coding downstream 23719 53996105 ~ 54008920 (-)
AMCG00017338 NA coding downstream 45930 53974133 ~ 53986709 (-)
AMCG00017332 tmem110,LOC108435844,LOC106582935,LOC107656046,LOC107755187,LOC103359875 coding downstream 60271 53960821 ~ 53972368 (-)
AMCG00017333 impdh2,LOC102785462 coding downstream 141991 53884651 ~ 53890648 (-)
AMCG00017327 NA coding downstream 168095 53857096 ~ 53864544 (-)
AMCG00017337 NA coding upstream 23868 54058029 ~ 54062385 (-)
AMCG00017341 NA coding upstream 30208 54064369 ~ 54091597 (-)
AMCG00017345 NA coding upstream 61703 54095864 ~ 54097123 (-)
AMCG00017344 NA coding upstream 73542 54107703 ~ 54116284 (-)
AMCG00017342 ruvbl1,LOC107721190,LOC107667375,LOC107568195 coding upstream 113063 54147224 ~ 54151848 (-)
G19918 NA non-coding downstream 117763 53894336 ~ 53914876 (-)
G19920 NA non-coding downstream 135187 53896824 ~ 53897452 (-)
G19875 NA non-coding downstream 163862 53864910 ~ 53868777 (-)
G19873 NA non-coding downstream 178011 53853983 ~ 53854628 (-)
G19741 NA non-coding downstream 613562 53418185 ~ 53419077 (-)
G19957 NA non-coding upstream 20675 54054836 ~ 54055099 (-)
G19992 NA non-coding upstream 22724 54056885 ~ 54057927 (-)
G20066 NA non-coding upstream 335591 54369752 ~ 54370666 (-)
G20078 NA non-coding upstream 418460 54452621 ~ 54454276 (-)
G20116 LOC106929785,LOC108235569,LOC103465231,LOC103143233,LOC106950531,LOC105927081,LOC106517999 non-coding upstream 460774 54494935 ~ 54498038 (-)
AMCG00017334 NA other downstream 75166 53953294 ~ 53957473 (-)
G19824 NA other downstream 268263 53762998 ~ 53764376 (-)
G19808 NA other downstream 303756 53676083 ~ 53728883 (-)
AMCG00017313 NA other downstream 501508 53452118 ~ 53531131 (-)
G19730 NA other downstream 644930 53383340 ~ 53387709 (-)
G19998 eefsec,LOC107568193,LOC107667374,LOC107712058,LOC107584423 other upstream 83103 54117264 ~ 54154094 (-)
AMCG00017343 NA other upstream 93526 54127687 ~ 54145216 (-)
G20064 NA other upstream 332623 54366784 ~ 54368016 (-)
AMCG00017358 LOC104930492,LOC103358728,LOC105927190 other upstream 493623 54527784 ~ 54535543 (-)
AMCG00017366 LOC105899076 other upstream 604262 54638423 ~ 54651864 (-)

Expression


Co-expression Network