G19957


Basic Information

Item Value
gene id G19957
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 54054836 ~ 54055099 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU24770
gcCTCTCGCGAGCTTTCCGTTTCcccagctgaatgaagtagcccttggttctTTTCTTCatcatctcccaccactctatgggagaatcaaaaaggtccttcagggtcctccactcctcgaggCGTCTGCTAAAGGTCTTAATCACACGAGGGTCatcgagcagagaggtgttgagcttccagaccccaggccccgaCTCCCGTGTGCTCGGAATGAGCACCTCTGTCGTCAGGAgtctgtggtctgaaaagaagaccgcctccg

Function

GO:

id name namespace
GO:0048731 system development biological_process
GO:0048513 animal organ development biological_process
GO:0007275 multicellular organism development biological_process
GO:0048568 embryonic organ development biological_process
GO:0048856 anatomical structure development biological_process
GO:0032501 multicellular organismal process biological_process
GO:0032502 developmental process biological_process
GO:0060034 notochord cell differentiation biological_process
GO:0030903 notochord development biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU24770 True 264 lncRNA 0.55 1 54054836 54055099

Neighbor

gene id symbol gene type direction distance location
AMCG00017339 NA coding downstream 45916 53996105 ~ 54008920 (-)
AMCG00017338 NA coding downstream 68127 53974133 ~ 53986709 (-)
AMCG00017332 tmem110,LOC108435844,LOC106582935,LOC107656046,LOC107755187,LOC103359875 coding downstream 82468 53960821 ~ 53972368 (-)
AMCG00017333 impdh2,LOC102785462 coding downstream 164188 53884651 ~ 53890648 (-)
AMCG00017327 NA coding downstream 190292 53857096 ~ 53864544 (-)
AMCG00017337 NA coding upstream 2930 54058029 ~ 54062385 (-)
AMCG00017341 NA coding upstream 9270 54064369 ~ 54091597 (-)
AMCG00017345 NA coding upstream 40765 54095864 ~ 54097123 (-)
AMCG00017344 NA coding upstream 52604 54107703 ~ 54116284 (-)
AMCG00017342 ruvbl1,LOC107721190,LOC107667375,LOC107568195 coding upstream 92125 54147224 ~ 54151848 (-)
G19923 NA non-coding downstream 13803 53904295 ~ 54041033 (-)
G19918 NA non-coding downstream 139960 53894336 ~ 53914876 (-)
G19920 NA non-coding downstream 157384 53896824 ~ 53897452 (-)
G19875 NA non-coding downstream 186059 53864910 ~ 53868777 (-)
G19873 NA non-coding downstream 200208 53853983 ~ 53854628 (-)
G19992 NA non-coding upstream 1786 54056885 ~ 54057927 (-)
G20066 NA non-coding upstream 314653 54369752 ~ 54370666 (-)
G20078 NA non-coding upstream 397522 54452621 ~ 54454276 (-)
G20116 LOC106929785,LOC108235569,LOC103465231,LOC103143233,LOC106950531,LOC105927081,LOC106517999 non-coding upstream 439836 54494935 ~ 54498038 (-)
G20118 NA non-coding upstream 455137 54510236 ~ 54510488 (-)
G19950 NA other downstream 20675 54032639 ~ 54034161 (-)
AMCG00017334 NA other downstream 97363 53953294 ~ 53957473 (-)
G19824 NA other downstream 290460 53762998 ~ 53764376 (-)
G19808 NA other downstream 325953 53676083 ~ 53728883 (-)
AMCG00017313 NA other downstream 523705 53452118 ~ 53531131 (-)
G19998 eefsec,LOC107568193,LOC107667374,LOC107712058,LOC107584423 other upstream 62165 54117264 ~ 54154094 (-)
AMCG00017343 NA other upstream 72588 54127687 ~ 54145216 (-)
G20064 NA other upstream 311685 54366784 ~ 54368016 (-)
AMCG00017358 LOC104930492,LOC103358728,LOC105927190 other upstream 472685 54527784 ~ 54535543 (-)
AMCG00017366 LOC105899076 other upstream 583324 54638423 ~ 54651864 (-)

Expression


Co-expression Network