G20013


Basic Information

Item Value
gene id G20013
gene name NA
gene type misc
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 54307795 ~ 54392591 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU24837
catttttatatttttttatttcaaatttggTCAATCTCTTTATTCCCCTCAGCCAACAAATGTTAACAGGATCAAACAGCATCACAGTCCattcctgcccccccaccccacacactgAACCCTGTACTGCTGCAGGagacccccgccccccccactaATCTCTGTCTGGTGCTCTCGGCCCAGTGCGGcttcatacaaataaacaaaaacaatcaagagGAGTCATGACAGGGCActtacagacagacaaacagacctCCCAACTGTCACTCCAATCTCTAACTACTaccaaacttaaaacaaaaaaagtttagaaTAAAAATGTCTCAAAGTGACTTGTTTAGGGGGATCAGGTGGCACCCCTCCCCGCTGACGGACTCGGCTGGACTGAGCTCTGCCGCGGCTCCGAGCCCGAGGGAGGCAGTGGGGCGGGGGATGCagcccaaaaaaagaaaagcattgatttattttagagTATCTGCAGCTCATCCTATATAAGCTGTAAgatgaggagaggagggggagggagcagcGGTCGGTGCTGTGATCTGGAGAACAGAGGGGAGCGCGGGACTGGNNNNNNNNNNaaaaaaaaaaaaaaaaatcgcatTGAAAGCCGAAACCACGCGACTGCAGCAAAACGcagtttacaaaaacaaacgcTTAAAACCAAGCGCCTCCTGACCAGAGGCACGGCCCCCCACCCCGGACCCCACATCCTCCGCCACGGACAGCTGGCAGTTGGCCACAGGTGTGTAAGGCAGGTCAGTGACAGGGTCTCTCTCCaattaacatgtttaatttcttaattgactGGGGCCAACAGTGTGGGGGGGCTGGCAGGCTGAGTTCACCTGGCCTGggctgaggtgtgtgtgtgtgtgagtgtgagtgag
>TU24839
aggtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgttgcatgtgTTCTCTTTTGCGTGTGCTGTAGTCTGTATGGTATTTGCCGTGTGTGGTCTGTGTATCGAGAGTTGTGCAGCGGGCCTACAGCACGTCCAGCAGGGTGTCGATCCGGGCCACCAGCTCCTGCCGGCGCGAGGACAGCTGCCGCTCGCTCTCCAGGTACGCCTCCTTCTTCAGCTTCCCACCCACCAGCCGCTCGGCCTCCTGCACGGCGCGCCACGCCAGCTCCTTCACCTGCCCGTCCAGCTTCTGGATCTCGGACACCTGGGGACGAGTTGGACCCAGAGAGTGAGTGGTAGAAAGAGGAGCGACAAGAAGCAGCACACATCCCTCCCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU24837 True 896 lncRNA 0.50 2 54316979 54392591
TU24839 False 388 TUCP 0.61 2 54307795 54318213

Neighbor

gene id symbol gene type direction distance location
AMCG00017347 NA coding upstream 99074 54205132 ~ 54208721 (+)
AMCG00017340 NA coding upstream 137285 54153607 ~ 54170510 (+)
AMCG00017336 NA coding upstream 251130 54036514 ~ 54056665 (+)
AMCG00017335 LOC108435819,LOC108440644,LOC107712078,LOC107721176 coding upstream 274758 54013561 ~ 54033037 (+)
AMCG00017324 NA coding upstream 424291 53876586 ~ 53883504 (+)
AMCG00017355 NA coding downstream 69318 54461909 ~ 54469135 (+)
AMCG00017361 LOC105927081,LOC106929785,LOC108235569,LOC106517999,LOC103143233,LOC103465231,LOC106950531,LOC107094004 coding downstream 100986 54493577 ~ 54495259 (+)
AMCG00017363 NA coding downstream 238047 54630638 ~ 54632572 (+)
AMCG00017364 NA coding downstream 274289 54666880 ~ 54673342 (+)
AMCG00017383 NA coding downstream 296332 54688923 ~ 54690827 (+)
G20006 NA non-coding upstream 136372 54171215 ~ 54171423 (+)
G19958 NA non-coding upstream 249875 54056860 ~ 54057920 (+)
G19899 NA non-coding upstream 266762 53948758 ~ 54041033 (+)
G19887 NA non-coding upstream 345957 53959463 ~ 53961838 (+)
G19889 NA non-coding upstream 392918 53912818 ~ 53914877 (+)
G20086 NA non-coding downstream 159549 54552140 ~ 54555325 (+)
G20136 NA non-coding downstream 222650 54615241 ~ 54615448 (+)
G20177 NA non-coding downstream 340429 54733020 ~ 54737869 (+)
G20218 NA non-coding downstream 402905 54795496 ~ 54797145 (+)
G19961 NA other upstream 241608 54064358 ~ 54066187 (+)
G19956 NA other upstream 252620 54054800 ~ 54055175 (+)
G19896 NA other upstream 360177 53939537 ~ 53947618 (+)
AMCG00017331 NA other upstream 371313 53915125 ~ 53936482 (+)
G19860 NA other upstream 443077 53864108 ~ 53864718 (+)
AMCG00017357 NA other downstream 30962 54423553 ~ 54452054 (+)
G20099 NA other downstream 135161 54527752 ~ 54529204 (+)
G20085 NA other downstream 180883 54573474 ~ 54582399 (+)
G20156 NA other downstream 270720 54663311 ~ 54664526 (+)
AMCG00017381 chchd4,LOC105017180,LOC107099931 other downstream 415875 54808466 ~ 54809106 (+)

Expression


Co-expression Network