G20028


Basic Information

Item Value
gene id G20028
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 54343402 ~ 54345777 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU24855
TGTCAATCAACTTTATTGGCTTCTGGAACAGtgcccctccccctcttttcctccctccctccctctttgtCACCCAGTCCTGGGTTTCTTATTTGGGTCGGTCCTGGTGACCCATTTTAATATCCCACTCCTGGCCCCACCCCGGCCTAACACTTCCACCCCCCCCTGCTCCTCTGGGGTCTCCGGCGCCTTCCTCTTCTGCAGGGGGGCGGCGCTCAACCAGTTCCTCATCATCTTACTGCTGGCTGAAGGAGGGGGGGgGCTCGGCTGCAGACAAGTTGGTGAGTTGTTGCGGGAGTTGTTGACAAGCGCAGAGACAGGGTGAAAGGTCAGGCAATCCGTGGGGCGCAGCAGCGTAAGGGCGTCCAGCGGCCGAACCTCCCCGAAGTCCAGCCAGCGCTGCACTGCGTCCTCCCCGTCCAGCACTGCCGGCATCCTGCAGCACAGCGCCATCAACACACGctctacacactgcacaccctGTCCCCCACGCTCTACACACTGCACAATCTACACCCTGCACCCCACCTGAAAGGCACGCACTACACACTGTGCTGTCCCCCCTGTGCCTCCTCTCACCGGTCGTGAATGCCCTGCAGGCTGGGGGAGGCCTCCACGGTGAGGACAGTGTAGCTGTAGAGGTCCTCCCCACCTCCGGGGGGCGACCAGCGGTCAAACAGCCCAGCCACCGTTAGCAGCTTCCAGCCTGTCCACTCGCTGCCCTCGCCCTCCTCac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU24855 True 736 lncRNA 0.63 2 54343402 54345777

Neighbor

gene id symbol gene type direction distance location
AMCG00017354 NA coding upstream 355 54335940 ~ 54343047 (+)
AMCG00017349 rab7a,rab7,LOC108254780,LOC106518505,LOC105017315,LOC107093905 coding upstream 8391 54325336 ~ 54335011 (+)
AMCG00017347 NA coding upstream 134681 54205132 ~ 54208721 (+)
AMCG00017340 NA coding upstream 172892 54153607 ~ 54170510 (+)
AMCG00017336 NA coding upstream 286737 54036514 ~ 54056665 (+)
AMCG00017350 ARPC4,arpc4,LOC103385929,LOC107094019,LOC107753787 coding downstream 6929 54352706 ~ 54357989 (+)
AMCG00017351 NA coding downstream 14232 54360009 ~ 54366128 (+)
AMCG00017348 NA coding downstream 20959 54366736 ~ 54372123 (+)
AMCG00017356 NA coding downstream 43555 54389332 ~ 54422632 (+)
AMCG00017355 NA coding downstream 116132 54461909 ~ 54469135 (+)
G20006 NA non-coding upstream 171979 54171215 ~ 54171423 (+)
G19958 NA non-coding upstream 285482 54056860 ~ 54057920 (+)
G19899 NA non-coding upstream 302369 53948758 ~ 54041033 (+)
G19887 NA non-coding upstream 381564 53959463 ~ 53961838 (+)
G19889 NA non-coding upstream 428525 53912818 ~ 53914877 (+)
G20086 NA non-coding downstream 206363 54552140 ~ 54555325 (+)
G20136 NA non-coding downstream 269464 54615241 ~ 54615448 (+)
G20177 NA non-coding downstream 387243 54733020 ~ 54737869 (+)
G20218 NA non-coding downstream 449719 54795496 ~ 54797145 (+)
G19961 NA other upstream 277215 54064358 ~ 54066187 (+)
G19956 NA other upstream 288227 54054800 ~ 54055175 (+)
G19896 NA other upstream 395784 53939537 ~ 53947618 (+)
AMCG00017331 NA other upstream 406920 53915125 ~ 53936482 (+)
G19860 NA other upstream 478684 53864108 ~ 53864718 (+)
AMCG00017357 NA other downstream 77776 54423553 ~ 54452054 (+)
G20099 NA other downstream 181975 54527752 ~ 54529204 (+)
G20085 NA other downstream 227697 54573474 ~ 54582399 (+)
G20156 NA other downstream 317534 54663311 ~ 54664526 (+)
AMCG00017381 chchd4,LOC105017180,LOC107099931 other downstream 462689 54808466 ~ 54809106 (+)

Expression


Co-expression Network