G20099


Basic Information

Item Value
gene id G20099
gene name NA
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 54527752 ~ 54529204 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU24970
cccaaacagaaaaaaattgtCTTTTATTGTCTCAGACATACGACTTTACACACAGGAATATAAGATAGAGAGGTATCTGAAATTGTCAAATattaacaattataaatattattataacattaataataatatggaatgTAGTTTCTTCTGTTTGTCTTCCATtatctgtcctttttttttcatttttagtattttttttttaaagaaatatttcaaataaataaatttctATATAGTCTCTGTCAATATCTTTTTAAATTCTTATATTTCTCTCTCGTCGCACAGACAGTTGGGCAGGGTCTCCATGTCCGTCCTCACTCCTCCTCCGGTGAGTGTGCTGCCCCCCCacgcagggagggagagaggagagagacggTGGGTGGAGAGAGCAGGGCACTAGCGGACTGCAGGCACTGtcctcctctctgtccctctttccTCCCCGTCTCTTCTTCGATGTTCAGGATAAAGTGTCTCTTCCTCCTGCAGACacagcccctctccctctccccgccCTCTCCTGGGGAcgggggagtgagagagggaggctcacagagagagagagcacagaaGGGAGGGAGTCACACAACACGCATAAGTCCCAGTTGTGTCCCAGTCACAGACGACTGACAGGCAGACTGTCCCGCCCGGCCCAGGGGACTCCCTTGAAGACCCCAGCTGAAGTCTCCGCACGGTCCCATGACCTGCAGAGCTCGCGGAGGCCTGTTTTTTGGGGTAGGGGAGGCTTGGAGGGGCACATTAGGTCTGCCTCTGTGTAGCCTGAGTGTTTAGCTTTCAGTTCAGTTCGTGGGTTtctcttgtttaaaaaacaaaacaaaaacaaacgcaAGGCTtttgtaaagagagagagagggagagagaaggtgGTAAGGATTAAGAGCTGAGCagttcaaaaaaagaaaatagagagAAGGCAAGGCTCTGCTCTCCCTTCTGTCCTCTCGGTCTCTCCTTTACACGCATGCACTCACGCAcatacacaacaacaaaaaacgctACACAGTTGCTCGTGGGCAGAAACCCCACCTCAGACAGGCGTGCCGTGGCCCCTACACACGGCACCACCCTCTCCCTTCACCCTCGTTTATCGATTCAGCCCTCGTCCCCTGGTGTCCCTCCCTCGGGAGTTTCTGGTCCGTCTCCTCAGTCTGATCAGATTCAGTTTCTCTTTCCAAGGACAGAAAGGGGGGATGGTGGGGAGAGGAGAGTGGCGTGTGGGGGCGGCGCCAGGGCGCGGCTGTGTCCCCCCCCTAGTCCCCGCTGTCGTCCTCCAGCTCCTTGACGATGGCGATGAGGTTCTGCAGGCCGAAGATGTAGCCGCTGTCCTGGCCCTCGTGCACCACGCTGGCGTCCCCGTAGTGTCTGCAGGTGGTGTGAGCGAAGTCGATCATGCGCACGTCCACCAGGGGGCAGCCCTCGCCCGCCCCTCCCG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU24970 True 1453 TUCP 0.52 1 54527752 54529204

Neighbor

gene id symbol gene type direction distance location
AMCG00017361 LOC105927081,LOC106929785,LOC108235569,LOC106517999,LOC103143233,LOC103465231,LOC106950531,LOC107094004 coding upstream 32493 54493577 ~ 54495259 (+)
AMCG00017355 NA coding upstream 58617 54461909 ~ 54469135 (+)
AMCG00017356 NA coding upstream 105120 54389332 ~ 54422632 (+)
AMCG00017348 NA coding upstream 155629 54366736 ~ 54372123 (+)
AMCG00017351 NA coding upstream 161624 54360009 ~ 54366128 (+)
AMCG00017363 NA coding downstream 101434 54630638 ~ 54632572 (+)
AMCG00017364 NA coding downstream 137676 54666880 ~ 54673342 (+)
AMCG00017383 NA coding downstream 159719 54688923 ~ 54690827 (+)
AMCG00017370 NA coding downstream 291932 54821136 ~ 54826385 (+)
AMCG00017382 NA coding downstream 307533 54836737 ~ 54837616 (+)
G20028 NA non-coding upstream 181975 54343402 ~ 54345777 (+)
G20006 NA non-coding upstream 356329 54171215 ~ 54171423 (+)
G19958 NA non-coding upstream 469832 54056860 ~ 54057920 (+)
G19899 NA non-coding upstream 486719 53948758 ~ 54041033 (+)
G20086 NA non-coding downstream 22936 54552140 ~ 54555325 (+)
G20136 NA non-coding downstream 86037 54615241 ~ 54615448 (+)
G20177 NA non-coding downstream 203816 54733020 ~ 54737869 (+)
G20218 NA non-coding downstream 266292 54795496 ~ 54797145 (+)
AMCG00017357 NA other upstream 75698 54423553 ~ 54452054 (+)
G20013 NA other upstream 135161 54307795 ~ 54392591 (+)
G19961 NA other upstream 461565 54064358 ~ 54066187 (+)
G19956 NA other upstream 472577 54054800 ~ 54055175 (+)
G19896 NA other upstream 580134 53939537 ~ 53947618 (+)
G20085 NA other downstream 44270 54573474 ~ 54582399 (+)
G20156 NA other downstream 134107 54663311 ~ 54664526 (+)
AMCG00017381 chchd4,LOC105017180,LOC107099931 other downstream 279262 54808466 ~ 54809106 (+)
AMCG00017369 ssr4,LOC107671948,LOC107737640,LOC108425558,LOC107560913 other downstream 313736 54842940 ~ 54846281 (+)

Expression


Co-expression Network