G20193 (pfkfb4,LOC104938990,LOC103365889,LOC106565814,LOC107718206,LOC108435436,LOC108254777)
Chromosome Information
Item |
Value |
chromosome id |
CM030122.1 |
NCBI id |
CM030122.1
|
chromosome length |
54868152 |
location |
54700570 ~ 54723791 (-) |
genome version |
AmiCal1_2021_bowfin_Genome |
Sequence
>TU25083
GGGGAGACGCGGGCGGACTGGCGGTGCAGCAGCAGCGGCGGCTCCTCGGTCCACAGCCACCATGGCGGCGTCGCCCAGAGAGCTCACGCAGAACCCGCTCAAGAAAATCTGGATGCCCTGTAAAAACGGCCTGCCGGAGCAGCACGCATCGCAGAGGAAGGtgtGCATGACCAACTGCCCCACGCTGATCGTCACGGTGGGTCTGCCGGCCAGGGGGAAGACGTACATCTCCAAGAAGCTGACGCGCTACCTCAACTGGATCGGAGTTCCCACCAAAGagTTCAACGTGGGTCAGTACCGGCGGGAGTGTGTGAAGATCTACAAGTCTTTCGAGTTCTTCCGTCCGGACAACGAGGAGGGCCTGAAGATCAGGAAGCAGTGCGCCTCCGCGGCTCTGAACGATGTGCGCCAGTACCTCAGCGAGGAGGGCGGGCAGGTGGCGGTCTTCGATGCCACCAACACGACCAGGGAGCGCCGGGGCACCATCGTGAAATTTGCCGAACAGAACGGTTacaaggtgagagagagagcgagagagagagaagaggtggagatggagggagggacagagggagatcTTAGCCCTGTATTGATGAGCTGCTGCTGTCTGACCACAGGTGTTCTTC
>TU25084
CGCAGAGTGACCGCTGCCCAAGTGAGTGACCTAATTGAGTGAGTGGGCCATCATTGACAGTCACAGTGAGAGGTGTCACTCAGGGTAGAGAGGGGGGCGGAgtttgtcagtctgtctgtatgtcagtgtgtcagagagagagctgcCACAGTTGGGCTGTGGTACAGTTTCTAAACACTGGGAGGCCCCATAGCAGTTACCGATGTATGGATCAAGTCCAGTCTGGTCCTCTCAGTTGTTCTGCCTGAGGTTTCTGGTCTTTGAGGGGCCACAGACATCCAGTGCAGCACAGTACAGGTTGctccagctgtgtgtgtttcagccCTGGTGCTCGCTGGCTTGCTGAGGAGCTGTGTCGTGGTGCTGTGTCGTGGTGCTGTGGAGCTGTGTCGTGGTGCTGTGTCGTGGTGCTGTGTGCAGCCCGGCAGGCGGAGAGGGAAGTGTGTGCGGGTGTGCGCTCAGCCCGCTCCCCCCGGCGCTGGAGAGCAGCAGCGAGATCACAGCCGCTCACAGCCGCTCAGTCCGCCTGGCTGCTCCGCTCGGCTCTCCGGCACGATGAGGGGATCGAGCCGCTGCAAGCACACGCAGCAGCCGGACAGGACAGtgtGCATGACCAACTGCCCCACGCTGATCGTCACGGTGGGTCTGCCGGCCAGGGGGAAGACGTACATCTCCAAGAAGCTGACGCGCTACCTCAACTGGATCGGAGTTCCCACCAAAGagTTCAACGTGGGTCAGTACCGGCGGGAGTGTGTGAAGATCTACAAGTCTTTCGAGTTCTTCCGTCCGGACAACGAGGAGGGCCTGAAGATCAGGAAGCAGTGCGCCTCCGCGGCTCTGAACGATGTGCGCCAGTACCTCAGCGAGGAGGGCGGGCAGGTGGCGGTCTTCGATGCCACCAACACGACCAGGGAGCGCCGGGGCACCATCGTGAAATTTGCCGAACAGAACGGTTacaaggtgagagagagagcgagagagagagaagaggtggagatggagggagggacagagggagatcTTAGCCCTGTATTGATGAGCTGCTGCTGTCTGACCACAGGTGTTCTTC
>TU25086
CGCAGAGTGACCGCTGCCCAAGTGAGTGACCTAATTGAGTGAGTGGGCCATCATTGACAGTCACAGTGAGAGGTGTCACTCAGGGTAGAGAGGGGGGCGGAgtttgtcagtctgtctgtatgtcagtgtgtcagagagagagctgcCACAGTTGGGCTGTGGTACAGTTTCTAAACACTGGGAGGCCCCATAGCAGTTACCGATGTATGGATCAAGTCCAGTCTGGTCCTCTCAGTTGTTCTGCCTGAGGTTTCTGGTCTTTGAGGGGCCACAGACATCCAGTGCAGCACAGccCTGGTGCTCGCTGGCTTGCTGAGGAGCTGTGTCGTGGTGCTGTGTCGTGGNNCTGTGTCGTGGTGCTGTGTGCAGCCCGGCAGGCGGAGAGGGAAGTGTGTGCGGGTGTGCGCTCAGCCCGCTCCCCCCGGCGCTGGAGAGCAGCAGCGAGATCACAGCCGCTCACAGCCGCTCAGTCCGCCTGGCTGCTCCGCTCGGCTCTCCGGCACGATGAGGGGATCGAGCCGCTGCAAGCACACGCAGCAGCCGGACAGGACAGtgtGCATGACCAACTGCCCCACGCTGATCGTCACGGTGGGTCTGCCGGCCAGGGGGAAGACGTACATCTCCAAGAAGCTGACGCGCTACCTCAACTGGATCGGAGTTCCCACCAAAGagTTCAACGTGGGTCAGTACCGGCGGGAGTGTGTGAAGATCTACAAGTCTTTCGAGTTCTTCCGTCCGGACAACGAGGAGGGCCTGAAGATCAGGAAGCAGTGCGCCTCCGCGGCTCTGAACGATGTGCGCCAGTACCTCAGCGAGGAGGGCGGGCAGGTGGCGGTCTTCGATGCCACCAACACGACCAGGGAGCGCCGGGGCACCATCGTGAAATTTGCCGAACAGAACGGTTacaaggtgagagagagagcgagagagagagaagaggtggagatggagggagggacagagggagatcTTAGCCCTGTATTGATGAGCTGCTGCTGTCTGACCACAGGTGTTCTTC
Function
symbol |
description |
pfkfb4
|
Predicted to enable 6-phosphofructo-2-kinase activity and fructose-2,6-bisphosphate 2-phosphatase activity. Predicted to be involved in fructose 2,6-bisphosphate metabolic process. Predicted to be active in cytosol.
|
NR:
description |
PREDICTED: 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 4-like isoform X3 |
GO: NA
KEGG: NA
RNA
RNA id |
representative |
length |
rna type |
GC content |
exon number |
start site |
end site |
TU25083 |
False |
626 |
TUCP |
0.61 |
5 |
54700570 |
54704280 |
TU25084 |
True |
1069 |
TUCP |
0.60 |
7 |
54700570 |
54723791 |
TU25086 |
False |
1018 |
TUCP |
0.60 |
7 |
54700570 |
54723791 |
Neighbor
gene id |
symbol |
gene type |
direction |
distance |
location |
AMCG00017367 |
qars,LOC107675620,LOC107693419
|
coding |
downstream |
38659 |
54654835 ~ 54661911 (-) |
AMCG00017368 |
NA
|
coding |
downstream |
105213 |
54589059 ~ 54595357 (-) |
AMCG00017365 |
arih2,LOC102785176
|
coding |
downstream |
113045 |
54580070 ~ 54587525 (-) |
AMCG00017359 |
slc25a20
|
coding |
downstream |
122477 |
54572425 ~ 54578093 (-) |
AMCG00017362 |
prkar2aa,LOC108265715,LOC107679546,LOC107591783,LOC107711958,LOC105906428
|
coding |
downstream |
130012 |
54570271 ~ 54570558 (-) |
AMCG00017375 |
NA
|
coding |
upstream |
1814 |
54725605 ~ 54729120 (-) |
AMCG00017374 |
mapk3
|
coding |
upstream |
9283 |
54733074 ~ 54748372 (-) |
AMCG00017373 |
dnah1
|
coding |
upstream |
26692 |
54750483 ~ 54789078 (-) |
AMCG00017378 |
NA
|
coding |
upstream |
68045 |
54791836 ~ 54794782 (-) |
AMCG00017377 |
LOC107672588
|
coding |
upstream |
73220 |
54797011 ~ 54805363 (-) |
G20137 |
NA
|
non-coding |
downstream |
85120 |
54615246 ~ 54615450 (-) |
G20131 |
NA
|
non-coding |
downstream |
92956 |
54607363 ~ 54607614 (-) |
G20122 |
NA
|
non-coding |
downstream |
120852 |
54579265 ~ 54579718 (-) |
G20118 |
NA
|
non-coding |
downstream |
190082 |
54510236 ~ 54510488 (-) |
G20116 |
LOC106929785,LOC108235569,LOC103465231,LOC103143233,LOC106950531,LOC105927081,LOC106517999
|
non-coding |
downstream |
202532 |
54494935 ~ 54498038 (-) |
AMCG00017366 |
LOC105899076
|
other |
downstream |
48706 |
54638423 ~ 54651864 (-) |
AMCG00017358 |
LOC104930492,LOC103358728,LOC105927190
|
other |
downstream |
165027 |
54527784 ~ 54535543 (-) |
G20064 |
NA
|
other |
downstream |
332554 |
54366784 ~ 54368016 (-) |
G19998 |
eefsec,LOC107568193,LOC107667374,LOC107712058,LOC107584423
|
other |
downstream |
546476 |
54117264 ~ 54154094 (-) |
AMCG00017343 |
NA
|
other |
downstream |
555354 |
54127687 ~ 54145216 (-) |
G20237 |
NA
|
other |
upstream |
113306 |
54837097 ~ 54838491 (-) |
Expression