G20193 (pfkfb4,LOC104938990,LOC103365889,LOC106565814,LOC107718206,LOC108435436,LOC108254777)



Basic Information


Item Value
gene id G20193
gene name pfkfb4,LOC104938990,LOC103365889,LOC106565814,LOC107718206,LOC108435436,LOC108254777
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information


Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 54700570 ~ 54723791 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence


>TU25083
GGGGAGACGCGGGCGGACTGGCGGTGCAGCAGCAGCGGCGGCTCCTCGGTCCACAGCCACCATGGCGGCGTCGCCCAGAGAGCTCACGCAGAACCCGCTCAAGAAAATCTGGATGCCCTGTAAAAACGGCCTGCCGGAGCAGCACGCATCGCAGAGGAAGGtgtGCATGACCAACTGCCCCACGCTGATCGTCACGGTGGGTCTGCCGGCCAGGGGGAAGACGTACATCTCCAAGAAGCTGACGCGCTACCTCAACTGGATCGGAGTTCCCACCAAAGagTTCAACGTGGGTCAGTACCGGCGGGAGTGTGTGAAGATCTACAAGTCTTTCGAGTTCTTCCGTCCGGACAACGAGGAGGGCCTGAAGATCAGGAAGCAGTGCGCCTCCGCGGCTCTGAACGATGTGCGCCAGTACCTCAGCGAGGAGGGCGGGCAGGTGGCGGTCTTCGATGCCACCAACACGACCAGGGAGCGCCGGGGCACCATCGTGAAATTTGCCGAACAGAACGGTTacaaggtgagagagagagcgagagagagagaagaggtggagatggagggagggacagagggagatcTTAGCCCTGTATTGATGAGCTGCTGCTGTCTGACCACAGGTGTTCTTC
>TU25084
CGCAGAGTGACCGCTGCCCAAGTGAGTGACCTAATTGAGTGAGTGGGCCATCATTGACAGTCACAGTGAGAGGTGTCACTCAGGGTAGAGAGGGGGGCGGAgtttgtcagtctgtctgtatgtcagtgtgtcagagagagagctgcCACAGTTGGGCTGTGGTACAGTTTCTAAACACTGGGAGGCCCCATAGCAGTTACCGATGTATGGATCAAGTCCAGTCTGGTCCTCTCAGTTGTTCTGCCTGAGGTTTCTGGTCTTTGAGGGGCCACAGACATCCAGTGCAGCACAGTACAGGTTGctccagctgtgtgtgtttcagccCTGGTGCTCGCTGGCTTGCTGAGGAGCTGTGTCGTGGTGCTGTGTCGTGGTGCTGTGGAGCTGTGTCGTGGTGCTGTGTCGTGGTGCTGTGTGCAGCCCGGCAGGCGGAGAGGGAAGTGTGTGCGGGTGTGCGCTCAGCCCGCTCCCCCCGGCGCTGGAGAGCAGCAGCGAGATCACAGCCGCTCACAGCCGCTCAGTCCGCCTGGCTGCTCCGCTCGGCTCTCCGGCACGATGAGGGGATCGAGCCGCTGCAAGCACACGCAGCAGCCGGACAGGACAGtgtGCATGACCAACTGCCCCACGCTGATCGTCACGGTGGGTCTGCCGGCCAGGGGGAAGACGTACATCTCCAAGAAGCTGACGCGCTACCTCAACTGGATCGGAGTTCCCACCAAAGagTTCAACGTGGGTCAGTACCGGCGGGAGTGTGTGAAGATCTACAAGTCTTTCGAGTTCTTCCGTCCGGACAACGAGGAGGGCCTGAAGATCAGGAAGCAGTGCGCCTCCGCGGCTCTGAACGATGTGCGCCAGTACCTCAGCGAGGAGGGCGGGCAGGTGGCGGTCTTCGATGCCACCAACACGACCAGGGAGCGCCGGGGCACCATCGTGAAATTTGCCGAACAGAACGGTTacaaggtgagagagagagcgagagagagagaagaggtggagatggagggagggacagagggagatcTTAGCCCTGTATTGATGAGCTGCTGCTGTCTGACCACAGGTGTTCTTC
>TU25086
CGCAGAGTGACCGCTGCCCAAGTGAGTGACCTAATTGAGTGAGTGGGCCATCATTGACAGTCACAGTGAGAGGTGTCACTCAGGGTAGAGAGGGGGGCGGAgtttgtcagtctgtctgtatgtcagtgtgtcagagagagagctgcCACAGTTGGGCTGTGGTACAGTTTCTAAACACTGGGAGGCCCCATAGCAGTTACCGATGTATGGATCAAGTCCAGTCTGGTCCTCTCAGTTGTTCTGCCTGAGGTTTCTGGTCTTTGAGGGGCCACAGACATCCAGTGCAGCACAGccCTGGTGCTCGCTGGCTTGCTGAGGAGCTGTGTCGTGGTGCTGTGTCGTGGNNCTGTGTCGTGGTGCTGTGTGCAGCCCGGCAGGCGGAGAGGGAAGTGTGTGCGGGTGTGCGCTCAGCCCGCTCCCCCCGGCGCTGGAGAGCAGCAGCGAGATCACAGCCGCTCACAGCCGCTCAGTCCGCCTGGCTGCTCCGCTCGGCTCTCCGGCACGATGAGGGGATCGAGCCGCTGCAAGCACACGCAGCAGCCGGACAGGACAGtgtGCATGACCAACTGCCCCACGCTGATCGTCACGGTGGGTCTGCCGGCCAGGGGGAAGACGTACATCTCCAAGAAGCTGACGCGCTACCTCAACTGGATCGGAGTTCCCACCAAAGagTTCAACGTGGGTCAGTACCGGCGGGAGTGTGTGAAGATCTACAAGTCTTTCGAGTTCTTCCGTCCGGACAACGAGGAGGGCCTGAAGATCAGGAAGCAGTGCGCCTCCGCGGCTCTGAACGATGTGCGCCAGTACCTCAGCGAGGAGGGCGGGCAGGTGGCGGTCTTCGATGCCACCAACACGACCAGGGAGCGCCGGGGCACCATCGTGAAATTTGCCGAACAGAACGGTTacaaggtgagagagagagcgagagagagagaagaggtggagatggagggagggacagagggagatcTTAGCCCTGTATTGATGAGCTGCTGCTGTCTGACCACAGGTGTTCTTC

Function


symbol description
pfkfb4 Predicted to enable 6-phosphofructo-2-kinase activity and fructose-2,6-bisphosphate 2-phosphatase activity. Predicted to be involved in fructose 2,6-bisphosphate metabolic process. Predicted to be active in cytosol.

NR:

description
PREDICTED: 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 4-like isoform X3

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU25083 False 626 TUCP 0.61 5 54700570 54704280
TU25084 True 1069 TUCP 0.60 7 54700570 54723791
TU25086 False 1018 TUCP 0.60 7 54700570 54723791

Neighbor


gene id symbol gene type direction distance location
AMCG00017367 qars,LOC107675620,LOC107693419 coding downstream 38659 54654835 ~ 54661911 (-)
AMCG00017368 NA coding downstream 105213 54589059 ~ 54595357 (-)
AMCG00017365 arih2,LOC102785176 coding downstream 113045 54580070 ~ 54587525 (-)
AMCG00017359 slc25a20 coding downstream 122477 54572425 ~ 54578093 (-)
AMCG00017362 prkar2aa,LOC108265715,LOC107679546,LOC107591783,LOC107711958,LOC105906428 coding downstream 130012 54570271 ~ 54570558 (-)
AMCG00017375 NA coding upstream 1814 54725605 ~ 54729120 (-)
AMCG00017374 mapk3 coding upstream 9283 54733074 ~ 54748372 (-)
AMCG00017373 dnah1 coding upstream 26692 54750483 ~ 54789078 (-)
AMCG00017378 NA coding upstream 68045 54791836 ~ 54794782 (-)
AMCG00017377 LOC107672588 coding upstream 73220 54797011 ~ 54805363 (-)
G20137 NA non-coding downstream 85120 54615246 ~ 54615450 (-)
G20131 NA non-coding downstream 92956 54607363 ~ 54607614 (-)
G20122 NA non-coding downstream 120852 54579265 ~ 54579718 (-)
G20118 NA non-coding downstream 190082 54510236 ~ 54510488 (-)
G20116 LOC106929785,LOC108235569,LOC103465231,LOC103143233,LOC106950531,LOC105927081,LOC106517999 non-coding downstream 202532 54494935 ~ 54498038 (-)
AMCG00017366 LOC105899076 other downstream 48706 54638423 ~ 54651864 (-)
AMCG00017358 LOC104930492,LOC103358728,LOC105927190 other downstream 165027 54527784 ~ 54535543 (-)
G20064 NA other downstream 332554 54366784 ~ 54368016 (-)
G19998 eefsec,LOC107568193,LOC107667374,LOC107712058,LOC107584423 other downstream 546476 54117264 ~ 54154094 (-)
AMCG00017343 NA other downstream 555354 54127687 ~ 54145216 (-)
G20237 NA other upstream 113306 54837097 ~ 54838491 (-)

Expression



Co-expression Network