G20218


Basic Information

Item Value
gene id G20218
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 54795496 ~ 54797145 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU25112
aaaatgaataatacattttaatgtgtttttccatattaatttcagtatattttaacactgcatGTTCACACACCAGAAACCTGTGCTGATTCCGTCATTCAGAGCAGCGCGCTGTGGTTGTGCTCAGTCCGGGCGGTGTTTGGGCTGTGAGTGTGGACTGATCGACAGACATGAATCTGATATGGGTTGATGAGCAACGATGGGAAACACAGCGTAGCAGGACGTTTAAACATATAATCGTCAAATCAGTGATATCAACAATTCTATTTTTACCAAAGAAATAccaaaaatgtgacatcagcaAATCAATTATTGATTTCAAAAATTGCTATTGGAAGTACATGGTAAACatttgttgatatcaacaatttaCTATTTTGATGAGTAAAcgttaagtgtgtgtgtgtgtgtgtgtgtgtgtctgtgtgtaattgtgtgtgtgtgtgtgtgtctatccaCCCCCTCAGCCCCGCAGCGCTGTGTCCAGCAGGCTGTCGTCCTGCACGCTGTGAGGCAGTGTGACCCGCAGACCCGCCTCCTCCGCCATGCTGCGCCGGACCGTGTCGAGGGCGTGACCGTTGCCAGCCCAGCAGCGCCG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU25112 True 598 lncRNA 0.46 2 54795496 54797145

Neighbor

gene id symbol gene type direction distance location
AMCG00017383 NA coding upstream 104669 54688923 ~ 54690827 (+)
AMCG00017364 NA coding upstream 122154 54666880 ~ 54673342 (+)
AMCG00017363 NA coding upstream 162924 54630638 ~ 54632572 (+)
AMCG00017361 LOC105927081,LOC106929785,LOC108235569,LOC106517999,LOC103143233,LOC103465231,LOC106950531,LOC107094004 coding upstream 300237 54493577 ~ 54495259 (+)
AMCG00017355 NA coding upstream 326361 54461909 ~ 54469135 (+)
AMCG00017370 NA coding downstream 23991 54821136 ~ 54826385 (+)
AMCG00017382 NA coding downstream 39592 54836737 ~ 54837616 (+)
AMCG00017371 wdr82,swd2,LOC107712117,LOC106565976,LOC107584451,LOC107673495 coding downstream 59681 54856826 ~ 54863910 (+)
G20177 NA non-coding upstream 57627 54733020 ~ 54737869 (+)
G20136 NA non-coding upstream 180048 54615241 ~ 54615448 (+)
G20086 NA non-coding upstream 240171 54552140 ~ 54555325 (+)
G20028 NA non-coding upstream 449719 54343402 ~ 54345777 (+)
G20006 NA non-coding upstream 624073 54171215 ~ 54171423 (+)
G20156 NA other upstream 130970 54663311 ~ 54664526 (+)
G20085 NA other upstream 213097 54573474 ~ 54582399 (+)
G20099 NA other upstream 266292 54527752 ~ 54529204 (+)
AMCG00017357 NA other upstream 343442 54423553 ~ 54452054 (+)
G20013 NA other upstream 402905 54307795 ~ 54392591 (+)
AMCG00017381 chchd4,LOC105017180,LOC107099931 other downstream 11321 54808466 ~ 54809106 (+)
AMCG00017369 ssr4,LOC107671948,LOC107737640,LOC108425558,LOC107560913 other downstream 45795 54842940 ~ 54846281 (+)

Expression


Co-expression Network