AMCG00017385


Basic Information

Item Value
gene id AMCG00017385
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030131.1
NCBI id CM030131.1
chromosome length 33043351
location 109675 ~ 171747 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00017385
GTAGGAGGCCAAGGAGGCTCTGGAGGCCAAGGACCGTTACATGGAGGAGATGGCTGACACTGCCGATGCCATTGAGATGGCCACTCTAGACAAGGAGATGGCGGAAGAGCGTGCAGAGTCACTGCAGCAGGAGGTGGACTCCCTGAAGGAGAAGGTGGAGGAGCTCACCATGGATCTGGAGATCCTAAAGCATGAGATCGAAGAGAAAGGCTCGGATGGAGCAGCCTCAAGCTATCATGTGAAACAGCTGGAGGAGCAGAATGGCAGACTCAAGGAAGCTCTTGTCAGGATGCGTGACCTGTCTGCCTCTGAGAAGCAGGAGCATGTGAAGCTGCAGAAGCAGATGGAGAAGAAAAACTCTGAGCTGGAGGTGCTGCGCCAGCAGAAGGAGAAGCTTGTGGAGGAAATGAAGCAGGCAGAGAAGACCATTGACGAGCTGAAAGAGCAGgtggATGCAGCGCTAGGAGCTGAAGAGATGGTGGAGACTTTGACCGAGAGGAACTTGGACCTGGAGGAGAAAGTGAGGGAGCTGCGAGAGACAGTCAGTGACCTGGAGGCCATCAACGAGATGAATGACGAGCTGCAGGAGAACGCGCGGGAGACTGAGTTGGAGTTGCGGGAGCAGTTGGACTTGGGCGGGGCCCGGGTCCGAGAGGCTGAGAAGAGAGTGGAGGCGGCACAGGAGACAGTAGCTGATTACCAACAGACCATCAAGAAATACAGAGAGCTGACTGCACACCTACAGGAGGTGAACCGAGATCTGATGAGCCAGCAGGAGGCGTCCGCagagcagcaacagcagcaggcCCCTGCTGAGATGTTCGACTTCAAGATCAAGTTTGCGGAGACCAAAGCTTACGCCAAGGCCATTGAAATGGAGCTGAGGAAGATGGAGGTGGGCCAGGCCAACAGGCAAGTGTCTCTGCTCACCTCCTTCATGCCAGACTCCTTCCTACGCCACGGGGGTGACCACGACTGCATCCTGGTGCTGCTGCTTATTCCAAGACTCATCTGCAAAGCGGAGCTGATCAGTAAGCAGGCTCAGGAGAAGTTCGACCTCAATGAGACGTGTacggagcgcagtggtctgcgCGGGGCAGGGGGCGAGCAGCTGAGCTTCGCGGCCGGCCTGGTCTACTCCCTCAGCCTGCTGCAGGCCACTCTGCACAAATACGAGCAAGCACTCAACCAGTGCAGTGTGGAGGTGTACAAGAAGATTGGCATGCTGTACCCTGAGATGAGTCAATTGTACAGCATCCATCTGGTTGAACAGCATGAGGACTGCACCATGCAGCTGGCAGACCACATCAGATTTACCCAGAGTGCCTTGGACTGCATGGCTGTGGAGGTGGGCAGGCTGCGGGCTTTCCTCCAGGCAGGGCAGGAAGCCTCTGATCTGGCCATCCTGCTGAAGGACCTGGAGACATCCTGCAGTGACATCCGCCAGTTCTGCAAGAAGATCCGCCGCAGGATGCCAGGCACTGATGTCCCTGGGATCCCAGCCGCACTCACCTTTGGCCAACAGgttGCTGACACTCTGATGGACTGCCGGAAGCATCTGACCTGGGTAGTGGCTGTCCTGCAGGAGGTGGCTGCAGCCGGAGCTCAGATGATTGCTCCTCTCTCAGAGCAGGAGGGCCTGTCTGCCCTCAAACTGGAGGACATGGCCTTCAAGGCTGGAGAACAGATTTACGGCTCTCAGGGCATTAACCCCTATGAGCGCCTACGCCAGTCATGCAGTATCGTCATCGCCACCATGAACAAGATGGCCACCGCCATGCAGGAGGGGGAGTACGACGCAGAGAGGCCACACAGCAGGGCCACTCCGCCGGTGGAGCTGAGAGCAGCTGCCCTGCGGGCCGAGATCACCGATGCCGAGGGCCTGGGGCTTAAACTGGAGGACCGGGAGACCGTGATCAAGGAGCTGAAGAAATCCCTCAAAATCAAGGGCGAAGAGCTGAGTGAGGCCAATGTGCGGTTGAGCCTCCTGGAGAAGAAGCTGGACAGCTCCTCCAAGGATGCAGACGAGCGCGTGGAGAAGATCCAGACCAAGCTGGACGAGACGCAGATGCTGCTcaagaagaaagagaaGGAGTTCGAAGAGACCATGGATGCTCTCCAGGCCGACATCGACCAGCTGGAGTCAGAGAAAGCAGAGTTGAAGCAGCGTCTCAACAACCAGTCCAAGATGACCATCGAGGGACTGAGAGGACCCCCTGCCTCGGGGATCGCCTCCATTGTCACCGGCATGGCAGGGGGAGTTGCTGCACCAGCCATGGGCATGGGCTCGGGACCCCTGCAGGTAGTTGACTCtcctctcctgcagcagcagATCGAGGCCCAACGCCTGGGCATCAAGCACCTCAAGAATGAGAACAACCGCCTCAAGGCTGAGAAGATGAATGCCCAGCTAGCCTCCTTGCCTCCTCTGCGTGTCTCCAAACTGCCCCTAAAACAGGGTGCAAGGACTGAGGTGCTCTCCAGCGCCCTCTACCGCAAGACCAACCAGCTGCTGGAGACATTGCTTCAGATGAGCGCCAACACCAAGGTGGTGGACATCACAGGCAAAACGCCAGTGAGTCCCAGTGCTCAGCTACTGGAACAAACAGCCCGGCTGAAGTCCCTGAGTGACACACTGGACAGACTGAAGGATGAAGTTGTGGAGCATGTGGTATCACAACGGCCTGGTGCTCGGGTGCCATCAGACTTTGCTACATTCCCCTCCACCGCCTTCGTCAAGGccaaggaggagaaggaggctgACATGGTGTACATCGGGAAGGTGATGGTCCCCTGTCCTCGGGGGCAGGAGCAGGTCCACAAGCTCATACTGTCACACCCACAGCTTCATCGGGTCCACCGCCTCCTTGTCTCCTAGGCAGCCTGCCAAGCTCTGCTTTCTCCAGCTGtatgtgcgtgtttgtgtgtgaaaactgCAGGATGCCTGAGCTGGGAAGGTGCTGCTCTCCACTGTAGCTCTCAAGGAGTACTCTGCAGGACTACTATTCCGACAAACTAATAGAAGGGGTGATTTCACTTATCAAcataaaattaaagcatacaaataaaacttgctattgtaagcATTCCAGGAAAGTGGGAGATCTCGAAAACTAGGTTGATGTTTTGAAATAGTtggccattattattttttttccaccaatCTGTCATTTATTCTCAATTCCTGCTAGATATTAATCATTTAGATTTGCAGAAACTAaatcttgcatttatttttagattttagattagAAATTACATAAAAGAAATCTTAATTCAATTGAGTATCTCAACATTTGGAATATAGCAgaacataatacatttgtatcaaTCAAGTCCTCTGTGGCATGGTTGTTTattccaagaaaaaaaagagtagATTACAGCACCCTCAATACATTATGGTGCAGTTAACCATATTCTTTGTACTTATTtactttgtaatcaaattaatttaaattcaaagatATGTCAAATCTGCACACATTGCTAACTAAGTTTACAATAAAGAAGCTAAAAAAGCTTGGTTGGGGAATGGTAACATCTGTAATGACTCATGCTGTAaaatttacagatttaaaattacAAGAATTAGATTAGTTCATTGTTCAGTTAGTTGTGAAATCTGTTCAATAGGCAATATTACATATTAGGGGCAACTATTGTATTACAACTTTAAGTGACCACCACCAtaaattttgttttcttgctatAATCAAATTATGCAATATTTGCTATAAAGGTCAAACTCTATTCTAAGTTTTGATTTGCATGCCAAGTCTCATACTGTTATATATAGAtgggtggatggatggatggtgttggaactttttaaaaagcatggcaaaacatgattcattatatttaaatgtatagtaaCAAATTCAGACAATAGAGCAAGTAGCAATGTTCCTACATATATGGCATTTTACATCCCTAACTGATAGTGTCATACCTGATTACAATAGCTGTAATTCCCTTCTAGTGGTGTTCTTTCAAGACCATTAAGCAAACCTCTGTAAAAGCAAATCTGGAATAAAAAGTCAAGTTAATCTGAAGATAGTTTTTCTGCTTCACTGATGATGACTAAAATGAACACTGGAATTTGACACATCAAAGCATGGTCACTTATGTTGTGAAAAGCTATGAATCTTTGCTTCAAGTATTACAAGATATTAACATGCACAAACATCTGTCCTCATCTTTAGCAATCAAAACTTGGCTCTGTGCAGTGAGAGTGCTAAAAGATACCTAGAGATTCTGTAGATTGGTATAATTATTATAGAGCAGCCTTAAAGGAGAACTTTGCAGTAAAGCCTTATTTAGAGCCCTTACGTGTACGTTTCGGAGAATTTCTTCAACACATCCTAGTAAATCCTTGCCAAAGAACATGTCATTTAACTAATTTGTTGTGGTTTTCCACCACCACTGGTGGAGCAAACATCAGCCTAGTAATACAATGACAGCAGTGATAgagtctatgtatgtatgtgtgtgtgtgtgtgtgtgtgtgtatattgtatgGAAAAGTTTGAAAATATGTTAACACAAACTCTGCAGCCATCATActtaaatttgaaatatgtcttgcaaatgtaatgtacagtTACAATTTATTTGCCGAGTTTAACagattaacacaaaacaaaacaaaaaatgtaaatgtggcATGTGCAAAGGTTTGGGCATCCTATCAGTCAGTACTTAGTAGCACCCCCACACAGCTTCCAAACATTTCTTGTAGCCAGCAAACAGTCTTTCTAGTCTTGttttaggatttattttcttcccactCTTCTTTGCAGAATGCATCTAGTTTAGAAATATTCTTAGGTCATCTTGCATGCACTGCATGTTTGAGATCTACccacagattttcaataatattaatgttggGGACTGTGAAGGTGATTCCAAAACCTTAATCTTTCATTTCTTAAAGTAGTTAATGGTTGACTTTGAGGTATGTTTTGAATCAATGTATTGTTGTAATATCCAACCTCTTTTCATCTTCAGTTTCTTCACTGACTGTGGGACATTAGCTTCCAGGATTTGTTGATACATAGTAGAATCCACAGACTATCGCcattctgcacagattctcAAGATAATTGGTTGTGTTCTTGTACTACAAATGTACGTAATTCTGAACAGAATCTGACCATTAAGCCACTAAATTCACAGTAGTTGTGTAGATTCTGTGTAGCATCATGTTAATCCGTGTAAGCGATCGTGACTAAATTGGTCAGGATCTGCCAGAATGATGATCGCccttttatgtgaaataaagttaattgtAAAAGTTAATCACACGCACATGCAACTTACTTAGTAGGTGCAGggtatgaaaaaatgtatataaaagaaagaaatacctgCACACTTTCCACAGCtccaatgcacaaataaaatgtatttatgtaacccatgcttcacaggtttttagcaaACACATGTGAATATGGTTCCTGATGAAGATCTCTTGTagatcaaaatgtttttgtgaaaaaaagatgaaatgctgttttaattgttgttttcacaTTATCATACACAGTGTTCCAGGAAAAAAATAGCTTGGTAAAATACAAACTcctcaaatacaaaaatctggtAATTTATTGttgaaaattatgtatttattttttaagaatgaatTAATCAGAAGCgttcaagtttaaaacaaagcagtcaTCTAAAAGCAGCGTACAGGATTACTGTAGGCccttatgcctcggttccactggcttaagcgtcgtgtcgtgccgtgccgtgccggacgcgtccgtCCTCAGAcacgtcccagagctttttctgcaaaaccaggccgctgtgattCGTCCCTCTGATGagaagagcagcgactgtgggtttgaattcttttgttttaaaaacagagaccgagaacaacactacgagcaatacagcctgacgtggagaggacttgtgtgtctgttttattatttgtgctttacatgattttaaaccgtgtaataaatataagtttctgttcagagatattaggaagagctaaacgtgtagacaacattatattcagacaagcacgttcACATAAGAATAAGTTTCCAtgcgcaacaataatactaaatagcaaatatgtattgctattattatcgtcatcatttgtgctagtatatatgtattttaaacggcacagcgtgactcccttaatttattactcttactacagatttgtaactgcaaacgatactttttgccatattatttataatttacttatcagacgtccttaacctgggcaagttacagtttaaacaaaatacacacgtttaacgatgaatcatccagatacaatatagcaggtttaattgaactaaagtgtgcacgtctcagtcatggcgtttatggacgcatttattaaaccagtccttatgttttagagggaaacccagatctgctgtatttatttattcatacatttttcttgcAAATTCATCatgttaactaaatcgtgttcgccttcacactgattgtctgcagattgtcctgcacaccattcgcaaaacacagcctgaaacatggccagttgttcataaaatattaagaatatcgGCTGataccgatccgattattatccttcagtttattttaactagtcaggcactgcaccggtcctgtgaaatccaagtgtttaatgaactcagatattaactgtaagcagtcattgtttctgtacgtgctgctaataaaactgcaatttcttcgtgatcgcacaggcacttgagattatatcttccgatacAATCCAGACgtgtccgccagtggaaacggagCATTACTGAACTGACCATGTTCAGAATTACTGCTAAAATCAGTAAAATACAGATTGTTAAGGTTTTGTATAGTTTctactgtaattaacatttatactacATATAAATTGATCAGATAGTActaggtttaattttgcatttactttgtgtactctttattagttgatggtagcatgttttattaaattgggTGAATTAGGTGGCTGTTATGACAAAagctgattgtgtttttttcctattgTGTTTAGCAATATatcctcattattttctgtgtacattTCCAACTTTCCAGCCGTTTTGttctaaacaaatacataatttagtcatggaaaaaaaaaaaaaatctgatttccaTGGGAACCCTGTGACTTAGATTTAAGGCCTAACGAATAAATTCAGTTTgaagaacttaaaaaaaaaaaaaataacacttagTGGATCAACTGGGAGGGTGCCTAAACATTTGCACTTGCCATATTTacagttaattttttttccaatctgttaaattcagcaaataaatagtaactgcatttaatttgcagAAATATGTCGTTAAGTTACAGAGGTTgtgtaaacaaaacatgtaatttggCCAGGGGTGCCAAACCTTTTGCATAtacacacgcgcgcacacaaaTTATATACTCATGACTTGCAGCTTCCCCCCCATGTGCTGAAGTACTACATTATATACTTTGGATCTGGTACAGGCATTACTCACTGCACTGTAATCATCTAATTAATAAAGCTTTATGAAGGAa

Function

GO: NA

KEGG:

id description
K04648 DCTN1; dynactin 1

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00017385 True 7579 mRNA 0.44 22 109675 171747

Neighbor

gene id symbol gene type direction distance location
AMCG00017389 NA coding downstream 249762 421509 ~ 440294 (+)
AMCG00017390 NA coding downstream 683531 855278 ~ 887994 (+)
AMCG00017392 lbx2,LOC105028271,LOC106604581,LOC106611617 coding downstream 1093695 1265442 ~ 1267334 (+)
AMCG00017399 NA coding downstream 1562685 1734432 ~ 1736022 (+)
AMCG00017398 NA coding downstream 1586639 1758386 ~ 1768848 (+)
G89784 NA non-coding upstream 66610 42802 ~ 43065 (+)
G89818 NA non-coding downstream 3303 175050 ~ 176503 (+)
G89819 NA non-coding downstream 5499 177246 ~ 179935 (+)
G89832 NA non-coding downstream 55504 227251 ~ 228724 (+)
G89837 NA non-coding downstream 170868 342615 ~ 402466 (+)
G89896 NA non-coding downstream 574007 745754 ~ 745999 (+)
AMCG00017386 dctn1,LOC101464740 other upstream 11278 48007 ~ 98397 (+)
AMCG00017388 LOC108267694,LOC106608525 other downstream 35839 207586 ~ 211936 (+)
AMCG00017422 leprotl1,LOC103152176 other downstream 2515673 2687420 ~ 2695453 (+)
AMCG00017445 NA other downstream 4421055 4592802 ~ 4606571 (+)
AMCG00017446 NA other downstream 4490878 4662625 ~ 4688223 (+)
AMCG00017486 NA other downstream 6557991 6729738 ~ 7188643 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_034340 dctn1a coding NC_007118.7 CM002891.2 1062972 ~ 1108935 (-)