AMCG00017389


Basic Information

Item Value
gene id AMCG00017389
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030131.1
NCBI id CM030131.1
chromosome length 33043351
location 421509 ~ 440294 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00017389
CAAAAGATTGCCCACTCGCGCATGCTTGCTAGGGATTTCTCTGTGCCCAAGGCCATAAGAATATTGAGTATTTGGGAACGTGGTCAACCGGCTCCTGAACCAATGATACCCGAGAACAGGAATAGATTACTTCGGAGAGGGTTTGCAAAGCGCTAaactacataatacatatataatcatATCACGCAGTAACAGTGAACATGTCTAAAAAGGGGAAAGATTCGGAAGGTTTTAGAGCAGTAAATTGTCCTACTGCTGAAGGAATTGACATCCTAAAAGCCCGTgaaGCTGAAAAAAATGCCAAAGAATTACTAGATGAGGAAGAAAGGgtaaaacaaaaagctgaaaaGAGGAAGCTTAAGAAAATGAggcaaaaagagagaaaacgacaagaaaaaactgaaaaagaaattaagaatgaaagtaaaaatGGGGAATTGGATTTCAACAGTTGTTTTATATCTAGCATTGCTAGACGTAAAAAGGAGCTTAAACCAAAACTagggaagaaagagaaaaataaaccttCTCCAAATAGATTGGAAGGCAGATCAGAGGGAGAACAGGAGGCTCAACAACAGAGATATGCTGAAGCTTCACAGGCATTTAAAGAAGTTTTAAAGCTGGACAGCACCTGCACTGATGCAGCACAGGAACTGATGAGAGTCCAGATCATTCAATTGATGGAAATGGGGTTTACTCGAGAGCAGAGTTCAAATGCTTTAATAATACACGGAACAGTTGAGAAGGCACTGGAAGCATTGTCCACTATTCATGATGGGAAACTTTTTAATGATAGCACCTCTGCAGTTGGTACCAGTCAAGTTGCTGAAGAGGAATGGATTGTATCAGGAAAAAAATCTCACCTTGCTTCGAAGCCTGCACATCTGGTCCAACCACAGCCTAatctgaaaagcaaaagcaacCATGTCAAGACACCGGCTGTACAGCAGCAGCCACCCCTGTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00017389 True 968 mRNA 0.41 8 421509 440294

Neighbor

gene id symbol gene type direction distance location
AMCG00017385 NA coding upstream 249762 109675 ~ 171747 (+)
AMCG00017390 NA coding downstream 414984 855278 ~ 887994 (+)
AMCG00017392 lbx2,LOC105028271,LOC106604581,LOC106611617 coding downstream 825148 1265442 ~ 1267334 (+)
AMCG00017399 NA coding downstream 1294138 1734432 ~ 1736022 (+)
AMCG00017398 NA coding downstream 1318092 1758386 ~ 1768848 (+)
AMCG00017402 NA coding downstream 1432333 1872627 ~ 1875428 (+)
G89837 NA non-coding upstream 19043 342615 ~ 402466 (+)
G89832 NA non-coding upstream 192785 227251 ~ 228724 (+)
G89819 NA non-coding upstream 241574 177246 ~ 179935 (+)
G89818 NA non-coding upstream 245006 175050 ~ 176503 (+)
G89784 NA non-coding upstream 378444 42802 ~ 43065 (+)
G89896 NA non-coding downstream 305460 745754 ~ 745999 (+)
G89898 NA non-coding downstream 437617 877911 ~ 878653 (+)
G89901 NA non-coding downstream 474709 915003 ~ 915213 (+)
G89908 NA non-coding downstream 530349 970643 ~ 971264 (+)
G89913 NA non-coding downstream 671660 1111954 ~ 1112159 (+)
AMCG00017388 LOC108267694,LOC106608525 other upstream 209573 207586 ~ 211936 (+)
AMCG00017386 dctn1,LOC101464740 other upstream 323112 48007 ~ 98397 (+)
AMCG00017422 leprotl1,LOC103152176 other downstream 2247126 2687420 ~ 2695453 (+)
AMCG00017445 NA other downstream 4152508 4592802 ~ 4606571 (+)
AMCG00017446 NA other downstream 4222331 4662625 ~ 4688223 (+)
AMCG00017486 NA other downstream 6289444 6729738 ~ 7188643 (+)
G90877 NA other downstream 7227889 7668183 ~ 7671850 (+)

Expression


Co-expression Network