AMCG00017390


Basic Information

Item Value
gene id AMCG00017390
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030131.1
NCBI id CM030131.1
chromosome length 33043351
location 855278 ~ 887994 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00017390
ATGGCGAACCATGACACGGGAGCCGACAGGGGGAAGGGAGGGTGGGGCAGAAGATCGGAGACTAAGATCATAAAGAGATTGCAAATTGCGGGGTCTCAGTGTTCCTGGGGGGACCACTCTCAGGTCTGCGCCAGACACTCAGGCTGTGCAGACCCGCTCGGGGGAATGACCAAACTGAACGCACACACAATATCTGCTCCAGACACTCAGGCTGCGCAGACCCGCTCGGGGGAATGCCCAAACCGAGCGCACACACAATATCTGCGCCAGACACTCAGGCTGCGCAAACCCGCTCAGGGCAACCGGGCGCAAAACCGTTCTCGAGATCACGATCAGACCTATGATGAGAAAGATGAGAACTCCTGGCCAGCCCTGTGGACTGAAAGTGAGAAGGTGTGGGTGAAAGATACTGCACGGAGGCAGGATGTTCAGCAGCAGGAGGATGGGATGTTAGTAACATCCATTGCCTGGGGTGTCTGGGATGGCAGGATCAGAAATGCGACCCCAAAACGTAAGACCTCGGCCTTCTAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00017390 True 531 mRNA 0.57 5 855278 887994

Neighbor

gene id symbol gene type direction distance location
AMCG00017389 NA coding upstream 414984 421509 ~ 440294 (+)
AMCG00017385 NA coding upstream 683531 109675 ~ 171747 (+)
AMCG00017392 lbx2,LOC105028271,LOC106604581,LOC106611617 coding downstream 377448 1265442 ~ 1267334 (+)
AMCG00017399 NA coding downstream 846438 1734432 ~ 1736022 (+)
AMCG00017398 NA coding downstream 870392 1758386 ~ 1768848 (+)
AMCG00017402 NA coding downstream 984633 1872627 ~ 1875428 (+)
AMCG00017403 NA coding downstream 988682 1876676 ~ 1894462 (+)
G89896 NA non-coding upstream 109279 745754 ~ 745999 (+)
G89837 NA non-coding upstream 452812 342615 ~ 402466 (+)
G89832 NA non-coding upstream 626554 227251 ~ 228724 (+)
G89819 NA non-coding upstream 675343 177246 ~ 179935 (+)
G89818 NA non-coding upstream 678775 175050 ~ 176503 (+)
G89901 NA non-coding downstream 27009 915003 ~ 915213 (+)
G89908 NA non-coding downstream 82649 970643 ~ 971264 (+)
G89913 NA non-coding downstream 223960 1111954 ~ 1112159 (+)
G89938 NA non-coding downstream 452907 1340901 ~ 1341295 (+)
G89983 NA non-coding downstream 692989 1580983 ~ 1589805 (+)
AMCG00017388 LOC108267694,LOC106608525 other upstream 643342 207586 ~ 211936 (+)
AMCG00017386 dctn1,LOC101464740 other upstream 756881 48007 ~ 98397 (+)
AMCG00017422 leprotl1,LOC103152176 other downstream 1799426 2687420 ~ 2695453 (+)
AMCG00017445 NA other downstream 3704808 4592802 ~ 4606571 (+)
AMCG00017446 NA other downstream 3774631 4662625 ~ 4688223 (+)
AMCG00017486 NA other downstream 5841744 6729738 ~ 7188643 (+)
G90877 NA other downstream 6780189 7668183 ~ 7671850 (+)

Expression


Co-expression Network