Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00017396 |
| gene name | NA |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030131.1 |
| NCBI id | CM030131.1 |
| chromosome length | 33043351 |
| location | 1599588 ~ 1600290 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00017396 | True | 471 | mRNA | 0.43 | 3 | 1599588 | 1600290 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00017395 | tlx2,LOC106611621,LOC106604594 | coding | downstream | 38402 | 1555528 ~ 1561186 (-) |
| AMCG00017394 | LOC106604596,LOC105028255,LOC106611619,LOC103363938,LOC104951404 | coding | downstream | 152007 | 1438528 ~ 1447581 (-) |
| AMCG00017393 | pcgf1,LOC107589114,LOC107710472,LOC107660820 | coding | downstream | 310155 | 1275232 ~ 1289433 (-) |
| AMCG00017391 | NA | coding | downstream | 662912 | 935881 ~ 936676 (-) |
| AMCG00017387 | NA | coding | downstream | 1129158 | 360455 ~ 470430 (-) |
| AMCG00017397 | NA | coding | upstream | 301 | 1600591 ~ 1601058 (-) |
| AMCG00017400 | NA | coding | upstream | 104656 | 1704946 ~ 1707277 (-) |
| AMCG00017401 | NA | coding | upstream | 171123 | 1771413 ~ 1781208 (-) |
| AMCG00017409 | loxl3,LOC106612874 | coding | upstream | 336832 | 1937122 ~ 1946925 (-) |
| AMCG00017410 | NA | coding | upstream | 347870 | 1948160 ~ 1964564 (-) |
| G89940 | NA | non-coding | downstream | 240607 | 1358684 ~ 1358981 (-) |
| G89939 | NA | non-coding | downstream | 258499 | 1340872 ~ 1341089 (-) |
| G89912 | NA | non-coding | downstream | 560117 | 1039272 ~ 1039471 (-) |
| G89909 | nanos1,nano1,LOC105894108,LOC106611616 | non-coding | downstream | 628160 | 968543 ~ 971428 (-) |
| G89900 | NA | non-coding | downstream | 687940 | 911396 ~ 911648 (-) |
| G90017 | NA | non-coding | upstream | 227390 | 1827680 ~ 1831528 (-) |
| G90066 | LOC107678491 | non-coding | upstream | 324918 | 1925208 ~ 1926851 (-) |
| G90093 | NA | non-coding | upstream | 454549 | 2054839 ~ 2055363 (-) |
| G90098 | NA | non-coding | upstream | 478750 | 2079040 ~ 2079244 (-) |
| G90129 | NA | non-coding | upstream | 585095 | 2185385 ~ 2185739 (-) |
| AMCG00017384 | LOC106911887,LOC104963986 | other | downstream | 1247802 | 160054 ~ 351786 (-) |
| G89804 | NA | other | downstream | 1493703 | 105685 ~ 105885 (-) |
| AMCG00017418 | NA | other | upstream | 1001493 | 2601783 ~ 2615562 (-) |
| AMCG00017426 | NA | other | upstream | 1111012 | 2711302 ~ 2841894 (-) |
| G90400 | NA | other | upstream | 2942485 | 4542775 ~ 4544760 (-) |
| G90501 | NA | other | upstream | 3558094 | 5158384 ~ 5221021 (-) |
| G90502 | NA | other | upstream | 3622183 | 5222473 ~ 5223047 (-) |
